Gene SNSL254_A4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4528 
Symbol 
ID6486176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4404168 
End bp4404857 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID642739754 
Productpeptidase E 
Protein accessionYP_002043436 
Protein GI194445800 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC TTTTATTAAG TAACTCGACG CTGCCGGGTA AGGCCTGGCT GGAACACGCT 
CTGCCGCTGA TAGCGAATCA ATTGAACGGT CGACGCTCAG CCGTGTTTAT TCCGTTTGCC 
GGCGTCACGC AAACATGGGA CGAGTACACG GATAAAACCG CAGAGGTGCT TGCGCCATTA 
GGGGTAAACG TCACAGGGAT TCATCGTGTC GCCGATCCGC TTGCGGCGAT TGAGAAAGCG 
GAAATCATTA TTGTCGGCGG CGGAAATACC TTCCAGCTAC TGAAAGAATC GCGTGAACGC 
GGGCTGCTGG CGCCGGTGGC GGACAGGGTA AAACGCGGCG CGCTGTATAT CGGCTGGAGC 
GCGGGCGCCA ACCTTGCCTG CCCGACTATC CGCACGACCA ACGATATGCC GATCGTCGAT 
CCAAACGGTT TCGACGCGCT GGATCTGTTC CCGCTGCAAA TTAATCCTCA CTTCACTAAC 
GCCTTGCCGG AAGGTCATAA GGGCGAGACC CGCGAGCAGC GTATTCGCGA ACTGCTGGTG 
GTCGCGCCGG AACTGGCAGT GATTGGTTTG CCGGAAGGTA ACTGGATTCA GGTGAGCAAC 
GGCCAGGCGG TTCTCGGCGG CCCGAATACC ACCTGGGTGT TTAAAGCGGG CGAGGAGGCC 
GTGGCGCTGG AAGCGGGTCA TCGCTTTTAA
 
Protein sequence
MELLLLSNST LPGKAWLEHA LPLIANQLNG RRSAVFIPFA GVTQTWDEYT DKTAEVLAPL 
GVNVTGIHRV ADPLAAIEKA EIIIVGGGNT FQLLKESRER GLLAPVADRV KRGALYIGWS 
AGANLACPTI RTTNDMPIVD PNGFDALDLF PLQINPHFTN ALPEGHKGET REQRIRELLV 
VAPELAVIGL PEGNWIQVSN GQAVLGGPNT TWVFKAGEEA VALEAGHRF