| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4526 |
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| Symbol | metH |
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| ID | 6484859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4398497 |
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| End bp | 4402180 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642739752 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002043434 |
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| Protein GI | 194446786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.267598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA AAGTTGAACA ACTGCGTGCG CAGTTAAATG AACGTATTCT GGTGCTGGAC
GGCGGTATGG GCACCATGAT CCAGAGCTAT CGTCTACATG AAGAAGATTT CCGCGGGGAG
CGCTTTGCCG ACTGGCCCTG CGACCTGAAA GGCAACAATG ACCTGCTGGT ACTCAGCAAG
CCGGAGGTGA TCGCCGCTAT CCACAACGCC TACTTTGAGG CTGGCGCGGA TATCATCGAA
ACCAACACCT TTAACTCGAC AACCATTGCG ATGGCGGATT ACCGGATGGA ATCCCTGTCG
GCGGAAATCA ACTATGCGGC GGCCAAACTG GCGCGCGCCT GCGCCGATGA ATGGACGGCG
CGAACACCAG AAAAACCACG TTTTGTTGCG GGCGTGCTTG GTCCAACTAA CCGCACGGCC
TCCATTTCGC CGGACGTCAA CGACCCGGCA TTTCGTAATA TCACCTTCGA TCAGCTGGTG
GCGGCCTACC GTGAATCCAC CAAAGCGCTG GTGGAAGGCG GGGCGGACCT GATCCTGATT
GAAACCGTCT TTGACACCCT GAATGCGAAA GCGGCGGTGT TTGCGGTGAA AGAAGAGTTT
GAAGCGCTGG GCGTTGATCT GCCGATCATG ATTTCCGGCA CCATCACCGA CGCCTCTGGC
CGTACGCTTT CCGGCCAGAC GACCGAAGCC TTTTATAACT CGCTGCGCCA CGCCGAGGCG
CTCACTTTTG GCCTTAACTG CGCGCTGGGG CCAGATGAAC TGCGCCAGTA CGTTCAGGAA
CTGTCGCGGA TTGCCGAATG CTACGTCACC GCGCACCCGA ACGCCGGCCT GCCGAACGCT
TTCGGCGAGT ATGACCTCGA CGCCGACACC ATGGCGAAAC AGATTCGCGA ATGGGCGGAA
GCGGGCTTCC TGAATATCGT TGGCGGCTGC TGTGGCACTA CGCCGGAGCA TATCGCCGCC
ATGAGCCGCG CCGTTGCCGG TTTGTCGCCG CGCCAGCTGC CGGATATCCC GGTGGCCTGC
CGCCTTTCCG GCCTGGAGCC GCTGAACATT GGTGACGATA GCCTGTTTGT GAACGTCGGC
GAACGTACTA ACGTCACCGG CTCGGCCAAA TTTAAACGGC TGATCAAAGA AGAGAAATAC
AGCGAAGCGC TGGATGTCGC CCGTCAGCAG GTAGAAAGCG GCGCGCAGAT TATTGATATC
AATATGGATG AGGGGATGCT CGACGCCGAA GCGGCGATGG TGCGTTTCCT CAGCCTGATT
GCCGGTGAGC CGGACATTGC CCGTGTACCA ATCATGATTG ACTCCTCCAA ATGGGAGGTT
ATCGAAAAAG GGCTGAAGTG CATTCAGGGT AAAGGCATCG TCAACTCTAT TTCGATGAAA
GAGGGCGTGG AAGCCTTTAT CCATCATGCG AAGTTGCTAC GTCGCTATGG CGCCGCAGTG
GTGGTGATGG CTTTTGATGA GCAGGGGCAG GCCGATACCC GCGAGCGTAA AATCGAAATT
TGCCGCCGAG CCTACAAAAT TCTCACCGAA GAGGTGGGCT TCCCGCCGGA AGACATCATT
TTCGACCCGA ATATCTTTGC CGTCGCCACC GGTATTGAAG AGCACAACAA CTACGCGCAG
GACTTTATCG GCGCCTGTGA GGACATCAAA CGCGAGCTGC CGCATGCGCT GATCTCCGGC
GGCGTGTCTA ACGTGTCCTT CTCGTTCCGC GGCAACGACC CGGTACGTGA GGCTATCCAC
GCGGTATTCC TCTACTACGC CATCCGCAAT GGCATGGACA TGGGCATCGT CAACGCCGGG
CAACTGGCGA TTTATGACGA CCTGCCTGCC GAACTGCGCG ATGCGGTTGA AGATGTCATT
CTTAACCGTC GCGATGACGG CACCGAGCGT TTGCTGGAAC TGGCCGAGAA ATACCGCGGC
AGCAAAACCG ACGAAGCTGC CAACGCCCAG CAGGCGGAAT GGCGTAGCTG GGACGTGAAA
AAGCGTCTCG AATACTCGCT GGTGAAAGGC ATTACCGAAT TTATCGAACA GGATACCGAA
GAAGCCCGCC AGCAGGCCTC CCGCCCGATT GAGGTGATTG AAGGCCCGCT GATGGACGGC
ATGAACGTGG TCGGCGACCT GTTCGGCGAA GGGAAAATGT TCCTGCCGCA GGTGGTGAAA
TCCGCTCGCG TGATGAAACA AGCGGTGGCT TACCTGGAGC CGTTTATTGA AGCCAGCAAA
GAAAAAGGCT CCAGCAACGG CAAGATGGTC ATCGCCACCG TGAAGGGCGA TGTGCACGAC
ATTGGCAAGA ACATTGTCGG CGTGGTGCTG CAATGCAACA ACTACGAAAT CGTCGATCTC
GGCGTGATGG TGCCAGCGGA GAAAATCCTC AGAACGGCGC GTGAAGTGAA TGCCGATCTG
ATTGGTCTTT CCGGGCTTAT CACCCCGTCG CTGGACGAAA TGGTCAACGT GGCGAAAGAG
ATGGAGCGTC AGGGCTTTAC TATCCCGCTA CTGATCGGCG GCGCAACCAC TTCGAAAGCG
CATACGGCGG TGAAAATCGA GCAGAACTAC AGCGGTCCGA CGGTCTACGT GCAGAATGCT
TCGCGTACCG TGGGCGTGGT GGCGGCGCTA CTCTCCGACA CCCAGCGTGA TGACTTTGTC
GCCCGTACCC GCAAAGAGTA CGAAACCGTG CGTATTCAGC ACGCCCGCAA AAAACCGCGC
ACGCCGCCGG TCACGCTGGA AGCGGCGCGC GATAACGATC TGGCATTCGA TTGGGAACGC
TACACCCCGC CGGTAGCCCA CCGTCTGGGC GTGCAGGAGG TGGAAGCCAG TATCGAAACT
CTGCGCAACT ACATCGACTG GACGCCGTTC TTTATGACCT GGTCGCTGGC CGGGAAGTAT
CCGCGTATCC TTGAAGATGA AGTGGTGGGT GAAGAGGCGC AGCGTTTGTT TAAAGACGCC
AATGATATGC TGGATAAACT GAGCGCCGAG AAACTGTTGA ATCCGCGTGG CGTGGTGGGC
CTGTTCCCGG CGAACCGCAT CGGCGATGAC ATCGAAATCT ATCGCGACGA AACCCGTACT
CATGTTCTGA CGGTCAGCCA CCACCTGCGC CAGCAGACCG AGAAAGTCGG TTTTGCCAAC
TACTGTCTGG CGGATTTTGT CGCGCCGAAA CTGAGCGGCA AAGCGGATTA CATCGGTGCG
TTTGCAGTCA CCGGCGGTCT GGAGGAGGAT GCGCTGGCGG ACGCCTTCGA AGCGCAACAC
GACGACTATA ACAAGATCAT GGTGAAAGCG ATTGCCGACC GTCTGGCGGA AGCGTTCGCG
GAATATCTGC ATGAGCGTGT ACGTAAGGTT TACTGGGGAT ATGCGCCGAA CGAGAGCCTG
AGTAACGACG AATTAATCCG CGAAAACTAC CAGGGGATTC GCCCGGCGCC GGGTTATCCT
GCCTGCCCGG AACATACCGA AAAAGGCACT ATCTGGCAGC TACTGGATGT CGAAAAACAC
ACCGGGATGA AGCTCACCGA ATCTTTCGCC ATGTGGCCTG GCGCGTCGGT CTCCGGCTGG
TACTTCAGCC ATCCTGAGAG CAAATACTTC GCGGTAGCGC AGATCCAACG CGATCAGGTG
ACAGATTATG CTTTCCGTAA AGGAATGAGC ATTGAGGATG TTGAGCGGTG GCTGGCGCCG
AACCTGGGTT ACGATGCGGA CTGA
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| Protein sequence | MSSKVEQLRA QLNERILVLD GGMGTMIQSY RLHEEDFRGE RFADWPCDLK GNNDLLVLSK
PEVIAAIHNA YFEAGADIIE TNTFNSTTIA MADYRMESLS AEINYAAAKL ARACADEWTA
RTPEKPRFVA GVLGPTNRTA SISPDVNDPA FRNITFDQLV AAYRESTKAL VEGGADLILI
ETVFDTLNAK AAVFAVKEEF EALGVDLPIM ISGTITDASG RTLSGQTTEA FYNSLRHAEA
LTFGLNCALG PDELRQYVQE LSRIAECYVT AHPNAGLPNA FGEYDLDADT MAKQIREWAE
AGFLNIVGGC CGTTPEHIAA MSRAVAGLSP RQLPDIPVAC RLSGLEPLNI GDDSLFVNVG
ERTNVTGSAK FKRLIKEEKY SEALDVARQQ VESGAQIIDI NMDEGMLDAE AAMVRFLSLI
AGEPDIARVP IMIDSSKWEV IEKGLKCIQG KGIVNSISMK EGVEAFIHHA KLLRRYGAAV
VVMAFDEQGQ ADTRERKIEI CRRAYKILTE EVGFPPEDII FDPNIFAVAT GIEEHNNYAQ
DFIGACEDIK RELPHALISG GVSNVSFSFR GNDPVREAIH AVFLYYAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRDDGTER LLELAEKYRG SKTDEAANAQ QAEWRSWDVK
KRLEYSLVKG ITEFIEQDTE EARQQASRPI EVIEGPLMDG MNVVGDLFGE GKMFLPQVVK
SARVMKQAVA YLEPFIEASK EKGSSNGKMV IATVKGDVHD IGKNIVGVVL QCNNYEIVDL
GVMVPAEKIL RTAREVNADL IGLSGLITPS LDEMVNVAKE MERQGFTIPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRTVGVVAAL LSDTQRDDFV ARTRKEYETV RIQHARKKPR
TPPVTLEAAR DNDLAFDWER YTPPVAHRLG VQEVEASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG EEAQRLFKDA NDMLDKLSAE KLLNPRGVVG LFPANRIGDD IEIYRDETRT
HVLTVSHHLR QQTEKVGFAN YCLADFVAPK LSGKADYIGA FAVTGGLEED ALADAFEAQH
DDYNKIMVKA IADRLAEAFA EYLHERVRKV YWGYAPNESL SNDELIRENY QGIRPAPGYP
ACPEHTEKGT IWQLLDVEKH TGMKLTESFA MWPGASVSGW YFSHPESKYF AVAQIQRDQV
TDYAFRKGMS IEDVERWLAP NLGYDAD
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