| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4496 |
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| Symbol | thiC |
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| ID | 6482808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4370628 |
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| End bp | 4372523 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642739726 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002043412 |
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| Protein GI | 194442345 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.000124533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTACAA CAACGTTAAC CCGCCGCGAG CAGCGCGCTA AAGCCCAGCA TTTTATCGAT
ACGCTGGAAG GCACCGCGTT TCCCAACTCG AAACGCATCT ACGTGACCGG TTCGCAGCAT
GATATTCGCG TACCGATGCG CGAAATTCAA CTTAGCCCCA CGCTCATCGG CGGCAGTAAA
GACAACCCGC AGTTTGAAGA GAACGAAGCC GTACCGGTAT ACGACACCTC CGGCCCCTAT
GGCGATCCTG AGGTGGCGAT TAACGTCCAG CAGGGTCTGG CGAAACTGCG CCAGCCATGG
ATTGACGCAC GTAACGATAG CGAAGAATTA GACGACCGTA GCTCGGCTTA TACCAGAGAA
CGTCTGGCCG ACGATGGCCT GGACGATCTG CGCTTTACCG GCCTGCTGAC GCCAAAACGC
GCTAAAGCGG GCAAGCGCGT CACCCAGTTA CACTACGCCC GCAAGGGGAT CGTCACTCCC
GAAATGGAGT TCATCGCCAT CCGTGAAAAT ATGGGCCGTG AGCGCATTCG CAGTGAAGTG
CTGCGCCACC AGCATCCGGG CATGAACTTT GGCGCGCGCC TACCGGAAAA CATTACGCCG
GAATTCGTGC GTGATGAAGT CGCCGCGGGC CGCGCGATTA TCCCTGCCAA CATCAACCAC
CCGGAATCGG AGCCGATGAT TATCGGCCGC AACTTCCTGG TCAAAGTGAA TGCCAACATC
GGTAACTCGG CGGTCACCTC CTCCATCGAA GAAGAGGTGG AGAAGCTGGT GTGGTCAACG
CGCTGGGGCG CAGACACGGT GATGGATCTC TCCACCGGCC GCTATATCCA CGAAACCCGC
GAATGGATCC TGCGTAACAG CCCGGTACCG ATCGGCACCG TCCCGATCTA CCAAGCGCTG
GAGAAGGTCA ACGGGATCGC CGAAGATCTT ACCTGGGAAG CGTTCCGCGA CACGCTGCTG
GAGCAGGCCG AACAGGGCGT CGACTACTTC ACCATTCACG CGGGCGTGCT GTTGCGCTAC
GTGCCGATGA CCGCCAAACG CCTGACCGGT ATTGTCTCGC GCGGCGGTTC GATCATGGCG
AAGTGGTGCC TCTCGCATCA CAAAGAGAAC TTCCTGTTCG AACATTTCCG CGAAATTTGT
GAAATCTGCG CCGCCTACGA CGTTTCCCTG TCGTTGGGCG ACGGCCTGCG CCCCGGCTCC
ATTCAGGACG CCAACGACGA AGCGCAGTTC TCCGAGCTGC ATACGCTGGG CGAATTGACC
AAAATCGCCT GGGAATACGA CGTGCAGGTG ATGATTGAAG GCCCGGGCCA CGTGCCGATG
CATATGATTC AGCGCAACAT GACCGAAGAG TTGGAGAGCT GCCACGAAGC GCCGTTCTAC
ACCTTAGGGC CGTTGACCAC CGATATCGCG CCGGGCTATG ACCACTTTAC CTCCGGCATT
GGCGCGGCGA TGATCGGCTG GTTTGGCTGC GCGATGCTGT GTTACGTGAC GCCGAAAGAA
CACCTCGGCC TGCCGAACAA AGAAGATGTG AAGCAGGGGC TGATCACCTA CAAAATCGCC
GCCCACGCCG CTGACTTAGC GAAAGGCCAT CCGGGCGCAC AGATCCGCGA TAACGCCATG
TCGAAAGCGC GCTTTGAATT CCGCTGGGAA GACCAGTTTA ACCTCGCGCT CGACCCTTTC
ACCGCCCGCG CTTATCACGA TGAAACCCTA CCGCAGGAGT CCGGTAAGGT CGCTCACTTC
TGTTCCATGT GCGGGCCGAA GTTCTGCTCG ATGAAAATCA GCCAGGAAGT CCGCGACTAC
GCCGCTGCAC AAACTATTGA AATCGGCATG GCGGATATGT CAGAGGACTT CCGCGCCAAA
GGCGGCGAAA TTTATCTCAA GCGGGAGGAA GCCTGA
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| Protein sequence | MSTTTLTRRE QRAKAQHFID TLEGTAFPNS KRIYVTGSQH DIRVPMREIQ LSPTLIGGSK
DNPQFEENEA VPVYDTSGPY GDPEVAINVQ QGLAKLRQPW IDARNDSEEL DDRSSAYTRE
RLADDGLDDL RFTGLLTPKR AKAGKRVTQL HYARKGIVTP EMEFIAIREN MGRERIRSEV
LRHQHPGMNF GARLPENITP EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI
GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL
EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA
KWCLSHHKEN FLFEHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF SELHTLGELT
KIAWEYDVQV MIEGPGHVPM HMIQRNMTEE LESCHEAPFY TLGPLTTDIA PGYDHFTSGI
GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM
SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY
AAAQTIEIGM ADMSEDFRAK GGEIYLKREE A
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