| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4483 |
|---|
| Symbol | rplJ |
|---|
| ID | 6485351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4356115 |
|---|
| End bp | 4356612 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642739717 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_002043403 |
|---|
| Protein GI | 194444696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.763348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0000000000000236313 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA ATCTTCAAGA CAAACAAGCG ATTGTTGCTG AAGTCAGCGA AGTAGCCAAA
GGCGCGCTGT CTGCAGTAGT TGCGGATTCC CGTGGCGTAA CTGTAGATAA AATGACTGAA
CTGCGTAAAG CAGGTCGTGA AGCTGGCGTA TACATGCGTG TTGTTCGTAA CACCCTGCTG
CGCCGCGTCG TTGAAGGTAC TCAGTTCGAG TGCCTGAAAG ACACGTTTGT TGGTCCGACC
CTGATTGCAT ACTCTATGGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCG
AAAGCGAATG CAAAATTTGA GGTCAAAGCT GCAGCCTTTG AAGGTGAGCT GATCCCGGCG
TCTCAGATCG ACCGCCTGGC AACTCTGCCG ACCTACGAAG AAGCAATTGC ACGCCTGATG
GCAACCATGA AAGAAGCTTC GGCTGGCAAA CTGGTTCGCA CACTGGCTGC TGTACGCGAT
GCAAAAGAAG CTGCGTAA
|
|---|
| Protein sequence | MALNLQDKQA IVAEVSEVAK GALSAVVADS RGVTVDKMTE LRKAGREAGV YMRVVRNTLL
RRVVEGTQFE CLKDTFVGPT LIAYSMEHPG AAARLFKEFA KANAKFEVKA AAFEGELIPA
SQIDRLATLP TYEEAIARLM ATMKEASAGK LVRTLAAVRD AKEAA
|
|---|
| |