| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4480 |
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| Symbol | nusG |
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| ID | 6484354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4353856 |
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| End bp | 4354401 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642739714 |
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| Product | transcription antitermination protein NusG |
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| Protein accession | YP_002043400 |
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| Protein GI | 194442714 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0050057 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000000000000047886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCTGAAG CACCTAAAAA GCGCTGGTAC GTCGTTCAGG CGTTTTCCGG TTTTGAAGGC
CGCGTAGCCA CATCGCTGCG CGAGCATATC AAATTACACA ATATGGAAGA GCTGTTTGGC
GAAGTCATGG TGCCGACTGA AGAAGTCGTT GAGATCCGTG GCGGCCAGCG TCGCAAAAGC
GAACGCAAAT TCTTCCCGGG TTACGTTCTG GTCCAGATGG TCATGAACGA CGCAAGCTGG
CACCTGGTGC GCAGCGTGCC GCGTGTGATG GGCTTTATCG GCGGTACGTC TGACCGTCCG
GCGCCGATCA GCGACAAAGA AGTCGATGCG ATCATGAACC GCCTGCAGCA GGTTGGCGAT
AAGCCGCGGC CGAAAACTCT GTTTGAACCG GGTGAAATGG TTCGTGTTAA CGACGGTCCG
TTCGCAGACT TTAACGGCGT TGTCGAAGAA GTTGATTATG AGAAGTCTCG CCTGAAAGTG
TCTGTTTCTA TCTTCGGTCG TGCGACCCCG GTAGAGCTGG ACTTCAGCCA GGTTGAGAAA
GCGTAA
|
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| Protein sequence | MSEAPKKRWY VVQAFSGFEG RVATSLREHI KLHNMEELFG EVMVPTEEVV EIRGGQRRKS
ERKFFPGYVL VQMVMNDASW HLVRSVPRVM GFIGGTSDRP APISDKEVDA IMNRLQQVGD
KPRPKTLFEP GEMVRVNDGP FADFNGVVEE VDYEKSRLKV SVSIFGRATP VELDFSQVEK
A
|
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