| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4460 |
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| Symbol | trmA |
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| ID | 6483409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4338261 |
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| End bp | 4339361 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642739697 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_002043391 |
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| Protein GI | 194442689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.967927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.000000000316798 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCCG AACATCTTCC GACAGAACAG TATGAGGCGC AGCTAGCCGA AAAAGTGGCG
CGCTTGCAGA GTATGATGGC GCCGTTTTCT GACCTGGTTC CGGAAGTATT TCGCTCGCCG
GTCAGTCACT ATCGTATGCG TGCGGAATTT CGCCTGTGGC ATGACGGCGA TGACCTGTAC
CACATTATGT TTGATCAGCA GACCAAAAGC CGGATTCGCG TTGACACCTT CCCGGCGGCC
AGCCAACTGA TTAATACCTT AATGAAGGCG ATGATTGCCG GCGTGCGCGA TAATCATGCA
CTGCGGCATA AGCTGTTCCA GATGGATTAT CTCACGACCT TGAGCAACCA GGCGGTAGTG
TCGTTGCTGT ACCATAAGAA GCTGGACGAA GAGTGGCGTG AAGCTGCCAC TGCGTTACGC
GATGCTTTAC GCGCGCAAGG TCTGAACGTA CACCTGATTG GCCGGGCCAC TAAAACCAAA
ATCGAATTGG ATCAGGATTA TATTGATGAG CGTCTGCCTG TGGCAGGTAA AGAGATGATC
TACCGCCAGG TCGAAAACAG CTTTACGCAG CCAAACGCCG CCATGAATAT TCAGATGTTA
GAGTGGGCGC TGGAGGTGAC GAAAGACTCA AAAGGCGATC TGCTTGAGTT GTATTGCGGC
AACGGCAATT TTTCTTTAGC GCTGGCGCGC AATTTTAACC GCGTGCTGGC AACCGAAATC
GCCAAACCGT CCGTCGCTGC CGCACAGTAC AATATTGCCG CTAATCATAT TGATAATGTG
CAAATTATTC GCATGGCGGC GGAAGAGTTT ACCCTGGCGA TGAATGGCGT TCGTGAGTTT
AACCGCCTGC AGGGGATCGA CCTGAAGGGC TATCAGTGCG AAACCATTTT TGTCGATCCG
CCGCGCAGCG GTCTGGACAG CGAAACGGAA AAAATGGTGC AGGCTTATCC ACGTATTCTG
TACATTTCCT GCAATCCGGA AACGTTGTGC AAAAACCTGG AAACGTTAAG CCAGACGCAC
ACGGTGTCTC GCCTGGCGCT ATTCGATCAG TTCCCGTATA CACATCATAT GGAATGCGGG
GTATTACTCA CCGCAAGGTA A
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| Protein sequence | MTPEHLPTEQ YEAQLAEKVA RLQSMMAPFS DLVPEVFRSP VSHYRMRAEF RLWHDGDDLY
HIMFDQQTKS RIRVDTFPAA SQLINTLMKA MIAGVRDNHA LRHKLFQMDY LTTLSNQAVV
SLLYHKKLDE EWREAATALR DALRAQGLNV HLIGRATKTK IELDQDYIDE RLPVAGKEMI
YRQVENSFTQ PNAAMNIQML EWALEVTKDS KGDLLELYCG NGNFSLALAR NFNRVLATEI
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TLAMNGVREF NRLQGIDLKG YQCETIFVDP
PRSGLDSETE KMVQAYPRIL YISCNPETLC KNLETLSQTH TVSRLALFDQ FPYTHHMECG
VLLTAR
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