Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4451 |
Symbol | argE |
ID | 6483202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4329900 |
End bp | 4331051 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739690 |
Product | acetylornithine deacetylase |
Protein accession | YP_002043384 |
Protein GI | 194442464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.600923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.000712813 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG TTTTACCGCC ATTTATCGAG ATTTACCGCG CTTTGATTGC CACACCGTCG ATAAGCGCAA CCGAAGAATC CCTGGATCAA AGTAATGCGT CTTTAATCAC TTTGCTTGCA GGCTGGTTCA GCGATCTTGG TTTCAACGTA GAGGTTCAAC CGGTTCCAGG AACGCGAAAC AAATTTAATA TGCTCGCCAG CACCGGACAT GGCGCGGGCG GTTTGCTGCT GACCGGCCAT ACCGACACGG TTCCCTTTGA TGACGGACGC TGGACGCGCG ACCCGTTCAC GCTGACCGAG CACGACAATA AGCTCTATGG TCTGGGCACT GCGGATATGA AAGGCTTCTT CGCTTTTATT CTGGACGCGC TACGTGACGT TGACGTCACA AAGTTGAAAA AGCCGCTCTA CATTCTGGCG ACCGCCGATG AAGAGACCAG CATGGCGGGG GCGCGTTATT TTTCCGAAAC CACGGCATTA CGTCCGGACT GCGCGATCAT TGGCGAACCG ACGTCGTTGC AACCGATACG CGCGCACAAA GGGCATATCT CTAATGTCGT TCGCGTCCTG GGGCAGTCCG GTCATTCCAG CGACCCGGCG CGTGGGGTTA ACGCCATTGA ACTGATGCAC GATGCGATTG GCCATATCAT GCAACTGCGT GACTCGCTGA AAGCGCGGTA TCACTACGAG GCGTTTACCG TTCCGTATCC AACGCTGAAT CTGGGCCATA TCCACGGCGG CGATGCCTCA AACCGTATCT GCGCCTGCTG CGAATTGCAT ATGGATATTC GTCCACTGCC GGGCATGACG TTAAACGACC TTAATGGACT GCTTAACGAC GCGCTGGCCC CGGTAAGCGA ACGCTGGCCG GGCCGTCTGA CGGTGGCGGA ATTACATCCG CCGATTCCAG GTTACGAGTG TCCACCGGAC CACCAACTGG TTGAAGTAGT AGAAAAACTG TTGGGAACAA AAACCGACGT GGTGAACTAC TGTACTGAAG CGCCGTTTAT GCAGACATTA TGCCCAACGC TGGTGCTTGG TCCGGGCTCA ATTAATCAGG CGCATCAGCC GGATGAATAT CTCGAAACGC GTTTTATTAA GCCAACCCGG GAATTGATTA CCCAGGTAGT ACACCATTTT TGCTGGCATT AA
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Protein sequence | MKNVLPPFIE IYRALIATPS ISATEESLDQ SNASLITLLA GWFSDLGFNV EVQPVPGTRN KFNMLASTGH GAGGLLLTGH TDTVPFDDGR WTRDPFTLTE HDNKLYGLGT ADMKGFFAFI LDALRDVDVT KLKKPLYILA TADEETSMAG ARYFSETTAL RPDCAIIGEP TSLQPIRAHK GHISNVVRVL GQSGHSSDPA RGVNAIELMH DAIGHIMQLR DSLKARYHYE AFTVPYPTLN LGHIHGGDAS NRICACCELH MDIRPLPGMT LNDLNGLLND ALAPVSERWP GRLTVAELHP PIPGYECPPD HQLVEVVEKL LGTKTDVVNY CTEAPFMQTL CPTLVLGPGS INQAHQPDEY LETRFIKPTR ELITQVVHHF CWH
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