| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4431 |
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| Symbol | metB |
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| ID | 6482393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4301340 |
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| End bp | 4302500 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642739670 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_002043364 |
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| Protein GI | 194444188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTA AACAGGCCAC TATCGCAGTG CGTAGCGGAT TAAACGATGA CGAACAATAC
GGCTGCGTTG TGCCGCCAAT TCACCTCTCC AGTACCTATA ACTTTACCGG TTTCAATGAG
CCGCGCGCGC ATGATTATTC CCGCCGCGGT AATCCCACGC GTGATGTGGT TCAGCGCGCA
TTAGCGGAAC TGGAAGGCGG CGCGGGCGCG GTATTGACGA ATACCGGCAT GTCGGCGATT
CATCTGGTCA CCACCGTTTT CCTCAAGCCG GGCGATCTGC TGGTCGCGCC GCATGATTGC
TACGGCGGCA GTTATCGTCT GTTTGACAGT CTGGCGACAC GCGGCTGTTA TCGTGTGCGG
TTTGTCGATC AGGGCGATGA ACGCGCCTTA CAGGCGGCGC TGGAAGAAAA ACCGAAGCTG
GTACTGGTAG AAAGTCCAAG CAATCCATTG TTACGCGTGG TGGATATTGC GAAAATCTGT
CGGCTGGCGC GCGAGGCGGG CGCAGTGAGC GTCGTTGATA ACACGTTTTT AAGCCCGGCG
CTGCAAAATC CGCTGGCGTT GGGTGCCGAT CTGGTGTTGC ATTCATGCAC GAAATATCTC
AACGGTCATT CGGATGTCGT GGCCGGCGTG GTGATTGCGA AAGATCCGGA AGTGGTCACT
GAACTGGCGT GGTGGGCGAA TAATATTGGC GTGACCGGCG GGGCGTTTGA TAGCTATCTG
CTGCTGCGCG GTTTGCGAAC TCTGGTGCCG CGTATGGAGC TGGCGCAGCG CAACGCGCAG
GCGATTGTGA AATATCTGCA AACCCAGCCG TTGGTGAAAA AACTGTATCA TCCGTCGCTG
CCGGAAAATC AGGGGCATGA AATTGCCGCG CGCCAGCAAA AAGGCTTTGG CGCAATGTTG
AGTTTTGAAC TGGATGGGGA TGAGGAGACG CTGCGTCGTT TTCTGGGCGG GCTGTCGCTG
TTTACGCTGG CGGAATCTTT AGGGGGAGTG GAAAGTTTGA TCTCTCACGC CGCCACCATG
ACGCATGCCG GTATGTCGCC GCAGGCGCGT GCCTCCGCCG GGATCTCCGA AACGCTACTG
CGTATCTCCA CCGGTATTGA AGATGGCGAA GATTTAATTG CCGATCTGGA AAATGGCTTC
CGGGCTGCAA ACAAGGGGTA A
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| Protein sequence | MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA
LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LATRGCYRVR
FVDQGDERAL QAALEEKPKL VLVESPSNPL LRVVDIAKIC RLAREAGAVS VVDNTFLSPA
LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPEVVT ELAWWANNIG VTGGAFDSYL
LLRGLRTLVP RMELAQRNAQ AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML
SFELDGDEET LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMSPQAR ASAGISETLL
RISTGIEDGE DLIADLENGF RAANKG
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