| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4425 |
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| Symbol | |
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| ID | 6482934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4294988 |
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| End bp | 4297186 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642739664 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_002043358 |
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| Protein GI | 194442479 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.981494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCG CGCACGTTGC CTTGCCCGTT CCGCTTCCCC GAACCTTTGA TTACCTGCTG
CCGGAAGGCG GGGTCGCCAA AGCCGGGTGC CGCGTGCGCG TGCCATTCGG CAAGCAGCAA
GAGCGCGTGG GCATTGTCGT CTCGGTTAGC GACCACAGCG AATTGCCGCT CGATGAATTA
AAATCGGTCA TTGAAATCCT GGATAACGAG CCAATCTTTT CTCCCTCCAT CTGGCGCTTA
CTCCTCTGGG CGGCAGATTA CTACCACCAT CCCCTCGGCG ACGTTCTGTT TCACGCTCTG
CCGGTTTTAT TGCGTCAGGG AAAACCAGCC AGCAACGCGC CCCTATGGTA TTGGTTCGCC
ACCGAAGAGG GGCAAGCCGT CGATATCAAC AGCCTGAAAC GCTCCGCCAA ACAACAACAG
GCGCTGGCGG CGCTACGGCA AGGAAAGATC TGGCGCTATC AGGTAGCCGA GCTTGATTTT
ACTGACGCCA CGCTGCAAAC GCTGCGGCGT AAGGGACTTT GTGAGCTTGC CAGTGAAACG
CCCGCGTTTA CCGACTGGCG GGAGCGTTAT GCCGTCGCAG GAGAGCGCCT GCGGCTGAAT
ACCGAACAGG CGACAGCAGT CGGCGCGATT CACAGCGCGT CGGACGGTTT CTCCGCCTGG
TTGCTGGCAG GCGTAACAGG TTCCGGCAAG ACCGAAGTGT ATCTGAGCGT GCTGGAAAAC
GTCCTCGCCC AGGGCAAACA GGCGCTGGTA ATGGTGCCGG AAATCGGCCT GACGCCGCAA
ACGATCGCCC GTTTTCGCGA ACGTTTTAAC GCGCCGGTGG AAGTGCTGCA TTCCGGGCTA
AACGACAGCG AGCGTCTTTC GGCATGGCTG AAAGCGAAAA ACGGCGAAGC GGCGATTGTC
ATCGGCACGC GTTCCTCGCT GTTTACGCCG TTTAAAAATC TTGGCGTGAT TGTCATCGAC
GAAGAGCACG ACAGCTCTTA TAAACAGCAG GAAGGGTGGC GCTACCACGC CCGCGATTTG
GCAGTGTATC GCGCCCATAG CGAGCAGATC CCGATTATTC TCGGCTCCGC CACCCCAGCC
CTGGAAACGC TATGTAACGT GCGGCAGAAA AAATACCGGA TGCTGCGTCT GACGCGGCGC
GCAGGCAACG CCCGCCCAGC TCTGCAGCAT GTGCTGGATT TAAAAGGCCA GCGTCTTCAG
GCGGGACTGG CGCCCGCCCT TATCGCCCGT ATGCGCCAAC ATCTCCAGGC CGACAATCAG
GTAATTTTAT TTCTTAACCG CCGGGGATTC GCGCCCGCGC TGCTTTGCCA CGACTGCGGC
TGGATTGCGG AGTGCCCGCG TTGCGATCAC TACTACACGC TGCACCAGGC GCAGCATCAT
TTACGCTGTC ATCACTGCGA CAGCCAACGT CCGGTACCGC GTCAGTGCCC CTCCTGCGGC
TCCACACATA TGCTACCGGT TGGGTTAGGG ACGGAACAGC TGGAGCAGGT GCTGGCGCCC
TTCTTCCCCG GCGTGCCGAT CTCACGAATC GACCGTGATA CCACCAGTCG TAAAGGCGCG
CTGGAGCAGC ATCTGGCGGA AGTTCACCGC GGCGGAGCGC GCATCCTGAT AGGCACACAA
ATGCTGGCGA AAGGCCATCA CTTCCCGGAC GTCACGCTGG TGGCGTTGTT GGACGTCGAT
GGCGCGCTTT TTTCCGCAGA TTTTCGTTCG GCGGAACGCT TCGCCCAGCT CTACACTCAG
GTTTCCGGCC GCGCCGGGCG CGCGGGCAAA CAGGGCGAAG TGGTGCTCCA AACGCACCAT
CCTGAGCATC CCCTGCTGCA AACGTTACTG TATAAAGGCT ATGATGCGTT TGCGGAGCAG
GCGCTGGCGG AACGGCAAAC GCTCCAGCTT CCGCCGTGGA CCAGCCACGT CATTATTCGC
GCAGAGGATC ATAACAATCA GCAGGCGCCC GTCTTTCTCC AACAGTTGCG TAATCTGATT
CAGGCCAGCC CGCTATCAGA CGATAAGCTG TGGATCTTAG GTCCGGTTCC GGCCCTCGCG
CCAAAACGCG GCGGCCGCTA TCGCTGGCAA ATTTTACTTC AGCATCCTTC ACGGATTCGC
CTGCAACACA TCATCAGCGG CACGCTGGCG TTGATCAATA CGCTCCCGGA AGCGCGGAAA
GTTAAATGGG TTCTGGACGT CGATCCGATT GAAGGATAG
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| Protein sequence | MSVAHVALPV PLPRTFDYLL PEGGVAKAGC RVRVPFGKQQ ERVGIVVSVS DHSELPLDEL
KSVIEILDNE PIFSPSIWRL LLWAADYYHH PLGDVLFHAL PVLLRQGKPA SNAPLWYWFA
TEEGQAVDIN SLKRSAKQQQ ALAALRQGKI WRYQVAELDF TDATLQTLRR KGLCELASET
PAFTDWRERY AVAGERLRLN TEQATAVGAI HSASDGFSAW LLAGVTGSGK TEVYLSVLEN
VLAQGKQALV MVPEIGLTPQ TIARFRERFN APVEVLHSGL NDSERLSAWL KAKNGEAAIV
IGTRSSLFTP FKNLGVIVID EEHDSSYKQQ EGWRYHARDL AVYRAHSEQI PIILGSATPA
LETLCNVRQK KYRMLRLTRR AGNARPALQH VLDLKGQRLQ AGLAPALIAR MRQHLQADNQ
VILFLNRRGF APALLCHDCG WIAECPRCDH YYTLHQAQHH LRCHHCDSQR PVPRQCPSCG
STHMLPVGLG TEQLEQVLAP FFPGVPISRI DRDTTSRKGA LEQHLAEVHR GGARILIGTQ
MLAKGHHFPD VTLVALLDVD GALFSADFRS AERFAQLYTQ VSGRAGRAGK QGEVVLQTHH
PEHPLLQTLL YKGYDAFAEQ ALAERQTLQL PPWTSHVIIR AEDHNNQQAP VFLQQLRNLI
QASPLSDDKL WILGPVPALA PKRGGRYRWQ ILLQHPSRIR LQHIISGTLA LINTLPEARK
VKWVLDVDPI EG
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