| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4424 |
|---|
| Symbol | cytR |
|---|
| ID | 6485813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4293808 |
|---|
| End bp | 4294833 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642739663 |
|---|
| Product | DNA-binding transcriptional regulator CytR |
|---|
| Protein accession | YP_002043357 |
|---|
| Protein GI | 194442800 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCGA ACAAGCAGGT TACTGCCGCT ACGATGAAGG ATGTTGCGTT GAAGGCGAAA
GTCTCTACGG CAACCGTATC CCGCGCGTTA ATGAACCCCG ATAAAGTCTC CCAGTCGACC
CGTAGCCGGG TTGAACAGGC CGCGCTTGAA GTGGGTTATT TCCCGCAGTC GATGGGGCGA
AATGTAAAAC GCAATGAATC CCGTACGATT CTGGTGATTG TCCCGGATAT TTGCGATCCC
TTCTTCAGTG AAATTATCCG CGGTATCGAA GTGACCGCGG CAGAACAGGG GTATCTGGTG
CTGATTGGCG ATTGCGCCCA TCAAAACCAG AAAGAAAAAA CCTTTCTTAA TCTCATCATC
ACCAAACAGA TCGACGGCAT GGTACTTCTC AGTTCCCGAC TGCCCTTTGA CGCCAGCGTT
GAGGAGCAGC GCAATTTGCC TCCGATGGTG ATGTCGAATG AGTTCGCGCC GGAGCTTGAA
CTGCCGACGG TACATATCGA TAACCTGACC GCCGCGTTCA ATGCCATGAA CTACCTGTTG
GATTTGGGCC ACAAGCGGAT TGGTTGTATT GCGGGGCCGG AAGATATGCC GCTCTGTCAC
TATCGCTTAC AAGGTTACGT ACAGGCATTA AGACGCAGTG GCATTGTGGT CGATCCGCAT
TACATCGCCC GTGGCGACTT TACCTTTGAA GCCGGGGCAA ACGCATTAAA GCAGTTGCTT
GAGCAACCGT TGCCGCCTAC CGCCGTCTTT TGTCATAGCG ACGTAATGGC GCTGGGCGCC
CTCTCCTGGG CCAAGCGCCA GGGTCTGAAA GTGCCTGACG ATCTGTCGAT TATCGGCTTT
GACAATATCG CGCTGGCCGA GTTTTGCGAC CCTCCGTTGA CAACCGTGGC GCAGCCGCGT
TTTGACATTG GTCGCGAGGC GATGCTGCTG TTGCTCGATC AGATGCAGGG GCAAAATGTG
AGCAGCGGCT CGCGTTTAAT GGATTGCGAG CTGATTATTC GCGGTTCTAC GCGCGCTTTA
CCCTAA
|
|---|
| Protein sequence | MKSNKQVTAA TMKDVALKAK VSTATVSRAL MNPDKVSQST RSRVEQAALE VGYFPQSMGR
NVKRNESRTI LVIVPDICDP FFSEIIRGIE VTAAEQGYLV LIGDCAHQNQ KEKTFLNLII
TKQIDGMVLL SSRLPFDASV EEQRNLPPMV MSNEFAPELE LPTVHIDNLT AAFNAMNYLL
DLGHKRIGCI AGPEDMPLCH YRLQGYVQAL RRSGIVVDPH YIARGDFTFE AGANALKQLL
EQPLPPTAVF CHSDVMALGA LSWAKRQGLK VPDDLSIIGF DNIALAEFCD PPLTTVAQPR
FDIGREAMLL LLDQMQGQNV SSGSRLMDCE LIIRGSTRAL P
|
|---|
| |