Gene SNSL254_A4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4388 
Symbol 
ID6485783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4260172 
End bp4260660 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID642739628 
Productgp25 
Protein accessionYP_002043322 
Protein GI194445941 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0559727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0446895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC TTGCTCTTGG AATGTTTGTA TTTGAACGTC GCACCCTGCC TTATCAGTCG 
ATGCAGCACT CGAAGAATTA CCGCTGGGCG TCTAATGACC GGGTCGGCAA ACCGCCTGCG 
TATCAGTTTC TCGGCAAGGG GGAAAACGCG ATCCAGCTTG CCGGTACGCT TTATCCTGCC 
ATTACTGGCG GTCGTATATC TCTGCTGGCT GTCGAGCTGA TGGCCGACGA GGGCAGAGCG 
TGGCCGCTGA TTGAGGGAAC CGGCAATATC TTCGGGATGT ATATCGTCGA GACGGTGTCG 
ACCACGCATA CCGAGTTTTT CAGCGACGGC GCGGCCAGAA AGATTGATTT CACCCTTTCG 
CTGAAACGGG TCGACGAATC ACTGACGGCA ATGTTTGGCG ACCTGAATAA GCAGGCCAGT 
GAGCTTCTCG GCTCTGCCGG TAATCTGACT GATAAGCTGC AGGGTGCGCT CGGAGGGCTG 
ACCGCATGA
 
Protein sequence
MMMLALGMFV FERRTLPYQS MQHSKNYRWA SNDRVGKPPA YQFLGKGENA IQLAGTLYPA 
ITGGRISLLA VELMADEGRA WPLIEGTGNI FGMYIVETVS TTHTEFFSDG AARKIDFTLS 
LKRVDESLTA MFGDLNKQAS ELLGSAGNLT DKLQGALGGL TA