Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4380 |
Symbol | |
ID | 6483977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4252471 |
End bp | 4253001 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739622 |
Product | phage tail protein I |
Protein accession | YP_002043316 |
Protein GI | 194445466 |
COG category | [R] General function prediction only |
COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.152838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.000126962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGACT CACGATTGCT GCCGGTAGGC TCATCGCCAC TGGAAGTTGC CGCCGCAAGG GCATGTGCTG AGATTGAAAG AACGCCGGTC AACATCCGCG CGTTGTGGAA CCCTGACACC TGTCCGGAAA ATTTGCTGCC GTGGCTGGCG TGGGCATTTT CTGTCGACCG GTGGGATGAG AACTGGCCGG AGGGAACAAA ACGTGCCGTT ATCCGTGATG CATATTTCAT TCACTGCCAC AAGGGGACTA TCGGCGCAAT CCGTCGGGTA GTGGAGCCAC TCGGCTATGT CATCAATGTA ACGGAATGGT GGGAAAGCGG CGACCCGCCA GGCACATTCC GGCTTGATAT CGGGGTGCTT GAAAGTGGCA TTACCGAGGA AATGTATTTC GAAATGGAGC GACTGATTGC GGATGCAAAG CCAGCCAGTC GTCATCTGAC TGGCCTGAAT ATTGTCCAGG ACATTCCCGG TTATTTGTAT ACCGGCGGCG TGTCCTGCGA CGGCGATATT ATTACGGTTT ACCCGGGATA A
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Protein sequence | MNDSRLLPVG SSPLEVAAAR ACAEIERTPV NIRALWNPDT CPENLLPWLA WAFSVDRWDE NWPEGTKRAV IRDAYFIHCH KGTIGAIRRV VEPLGYVINV TEWWESGDPP GTFRLDIGVL ESGITEEMYF EMERLIADAK PASRHLTGLN IVQDIPGYLY TGGVSCDGDI ITVYPG
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