Gene SNSL254_A4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4380 
Symbol 
ID6483977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4252471 
End bp4253001 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content54% 
IMG OID642739622 
Productphage tail protein I 
Protein accessionYP_002043316 
Protein GI194445466 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000126962 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGACT CACGATTGCT GCCGGTAGGC TCATCGCCAC TGGAAGTTGC CGCCGCAAGG 
GCATGTGCTG AGATTGAAAG AACGCCGGTC AACATCCGCG CGTTGTGGAA CCCTGACACC
TGTCCGGAAA ATTTGCTGCC GTGGCTGGCG TGGGCATTTT CTGTCGACCG GTGGGATGAG
AACTGGCCGG AGGGAACAAA ACGTGCCGTT ATCCGTGATG CATATTTCAT TCACTGCCAC
AAGGGGACTA TCGGCGCAAT CCGTCGGGTA GTGGAGCCAC TCGGCTATGT CATCAATGTA
ACGGAATGGT GGGAAAGCGG CGACCCGCCA GGCACATTCC GGCTTGATAT CGGGGTGCTT
GAAAGTGGCA TTACCGAGGA AATGTATTTC GAAATGGAGC GACTGATTGC GGATGCAAAG
CCAGCCAGTC GTCATCTGAC TGGCCTGAAT ATTGTCCAGG ACATTCCCGG TTATTTGTAT
ACCGGCGGCG TGTCCTGCGA CGGCGATATT ATTACGGTTT ACCCGGGATA A
 
Protein sequence
MNDSRLLPVG SSPLEVAAAR ACAEIERTPV NIRALWNPDT CPENLLPWLA WAFSVDRWDE 
NWPEGTKRAV IRDAYFIHCH KGTIGAIRRV VEPLGYVINV TEWWESGDPP GTFRLDIGVL
ESGITEEMYF EMERLIADAK PASRHLTGLN IVQDIPGYLY TGGVSCDGDI ITVYPG