Gene SNSL254_A4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4376 
Symbol 
ID6483227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4249158 
End bp4250501 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content37% 
IMG OID642739618 
Producthypothetical protein 
Protein accessionYP_002043312 
Protein GI194442263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000112995 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAATA AAAAATATCA AGTATTTGTG AGCTCTACAT ATGTCGATTT AATTGATGCT 
CGCAAAAAAA TCATAGAAAC GGTCCTTAGT TTATACCACT TTCCAGTTGG CATGGAGATG 
TTTAGTGCTG ATGACTCTGA ACAGTGGGAT ATAATAAAGG AGACTATTGA TGCTAGTGAT 
TATTATGTGA TTATCATTGG GCATAAATAC GGGTCCGTTT CTAAAGATGG TATTAGCTAT 
ACTGAAATGG AATATAACTA TGCTAAATCA TTAAATATAC CAGTGTTGGC TTTTATTAGA 
GGGAGGGACG TTTTAACAAA ACCACATGAG CGAGAAAGTG ACCCTCAAAA AGAAAAGCAA 
CTAAATGCTT TTATTGAAAA AGCTAAAGCT AACAAAATGT GTGATTTTTG GGAGACAATT 
GATGAGTTAG CGACGAAGGT TGCTATCGCC TTACCAAAAG TAATGCGACG GAATCCACGA 
ACAGGATGGG TGCGCGGTGA CCAGGTCGCA TCTAAAGAGA TTACCGCCGA GTTGGCTGAG 
CTATCTAATG AGAATAGAAA ACTAAGGGAA AAAATCCGCG AATATGAAAG CCAATTACAT 
AGCGATGCAC CTCAATTAGA ACTGAGCATG ATTGATAATG ACTTAACTTT GACGGTGGAT 
GCGGAGTCGA CTTATCAAGA GTACCTTCCA CAATTATGCA AGGAAGCGGT ACCTCTTGAG 
TTGAAGGACA CTATCACCAC TGATGAGATT GAATCATATA ACTCTTCACT GCCAACTGAT 
AAAGAGGTGG ATTTATATAA TAAAAAAATG AGATTGCACT GTAATTACAA AAATAATGCA 
ATTACAGTAA GTCCCGTTTT AAGAAATAAT GGGAGGACTT TTGCGTCAAA TGTTTATGTT 
GAGATTGATT TTCCTGAATT TCTAATAGTG CTTAAAGGTT CTAATGAAGA CTTCTTTATA 
AAAGAGCCGA AATTAAAAAT CCCTGAGTCC CCAATAAGTA AGCATAAAAA AAGACTCAGT 
GCTTTAATGT CACTCGAAAA TTTTAGGATG GGTATTTTTG ATGAGACATC GATAGCAATA 
GCTAAACCTC ATTTCGAAGT GCCAGCAATA ATTAATCGAA TAGCTGATTT AGGAACAGTT 
AACCAAGATG TGTGGGTTAT GAAAGAGGAC CATAAAATCA CGTTGCGTGC GAAAAAAGTG 
TTACAGAGCT TAACTGTTGA GTATGAAGAA ATAGTCATCA TTCCCTTAAC GATTGGCACT 
GGAGTTATTA ATTTTAAAAT TATATGTGAG CAATTGAAGG AGCCTGTTGT TTTTTCTCGT 
CAGGTCACAG TTACCGCCAG CTAG
 
Protein sequence
MENKKYQVFV SSTYVDLIDA RKKIIETVLS LYHFPVGMEM FSADDSEQWD IIKETIDASD 
YYVIIIGHKY GSVSKDGISY TEMEYNYAKS LNIPVLAFIR GRDVLTKPHE RESDPQKEKQ 
LNAFIEKAKA NKMCDFWETI DELATKVAIA LPKVMRRNPR TGWVRGDQVA SKEITAELAE 
LSNENRKLRE KIREYESQLH SDAPQLELSM IDNDLTLTVD AESTYQEYLP QLCKEAVPLE 
LKDTITTDEI ESYNSSLPTD KEVDLYNKKM RLHCNYKNNA ITVSPVLRNN GRTFASNVYV 
EIDFPEFLIV LKGSNEDFFI KEPKLKIPES PISKHKKRLS ALMSLENFRM GIFDETSIAI 
AKPHFEVPAI INRIADLGTV NQDVWVMKED HKITLRAKKV LQSLTVEYEE IVIIPLTIGT 
GVINFKIICE QLKEPVVFSR QVTVTAS