Gene SNSL254_A4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4364 
Symbol 
ID6484579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4241418 
End bp4243187 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content58% 
IMG OID642739606 
Producthypothetical protein 
Protein accessionYP_002043300 
Protein GI194444881 
COG category[S] Function unknown 
COG ID[COG5484] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000000000106491 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCACCA CCAACGACAC ATCACTACTC AGCGACCCGC GACGACAGGC CGCGCTTTTG 
TTCTGGCAGG GCTATTCCGT GCCACAAATC GCGGAGCAGT TACAGGTCAA GCGCACCACG
GTGCAGAGCT GGAAACAGCG CGATAAATGG GAAGAAACCG CCCCGTTAAA CCGGGTCGAG
TTCACGCTCG AGGCGCGACT GATTCAGCTC TATGCAAAGC CTGACCTGAC GGCTCACGAC
TTTAAGGTCG CGGATTTTCT GGCGCGCCAG ATGGAGCGCC TCGCGCGGGT TAACCGCTAC
GGCCAGACCG GCAACGAAGC GGATTTAAAC CCGAACGTGG CCAACCGCAA CAAAGGGGAA
AAGAAGAAGC CGAAAAAGAA CTTTTTCAGC GAAGAGGCTA TCGAGAAACT CGAAGAGATT
TTCCTCGAGC AGTCTTTCGA CTATCAGCTC GAGTGGTGGC GCGCGGGGCT GGCGCACCGC
ATCAGGCACA TTCTGAAATC GCGACAGATT GGCGCGACGT TCTATTTTGC ACGTGAGGCA
CTGTTACAGG CGCTGAAGAC CGGCCACAAC CAGATATTTT TGTCGGCCAG TAAGACGCAA
GCCTATGTAT TCCGTAAATA CATTATCGCC TTTGCCCGAC AGGCTGGCGT CGAACTTACC
GGCGACCCGA TTGTTCTCGG CAACAATGGC GCGGAGCTGA TGTTTCTCGG TACCAATGCC
AACACGGCAC AGAGCCACAA CGGTGACCTG TACGTCGACG AAATTTTCTG GATCCCCAAC
TTTCAGAAAC TGAAGCGCGT CGCCGGGGGG ATGTCGTCAC AGGAGCATTT ACGCACGACC
TATTTTTCGA CCCCCTCATC GCTGGCGCAC GGCGCTTACC CGTTCTGGTC GGGTGAGCAG
TTCAACAAGG GGCGCTCAGA CACGAGCGAG CGCGTCGATA TTGACATCAG CCACGCCGCA
CTCGCGAAGG GCGTCGCCTG TCCTGACGGT CAGTGGCGAC AGATTGTCAC CATCGAGGAC
GCCCTCGCCA AAGGGTGCAC CCTGTTCAAC ATCGATACGC TGAAGCGCGA GAACAGTGTC
GATGAGTTCC GCAACCTGTT TATGTGCGAG TTCGTCGACG ATAAAGCGTC GGTATTCCCG
TTCGAAGAGC TCCAGCGTTG CATGGTCGAC AGCCTCGAGA AATGGGAGGA CTACGCGCCA
TTTGCCGACC GGCCATTCGG TCACCGCCCG GTGTGGATTG GCTACGACCC GTCATTACGT
GGCGACAGCG CCGGGTGCGT CGTTATCGCG CCGCCGGTCG TTGCCGGTGG TAAATTCCGC
ATCCTCGAGC GTCACCAGTG GAAAGGGATG GACTTCGCCC AACAGGCCGA ATCCATTCGC
GAGCTCACGC AGAAATACAC CGTGGAATAT ATCGGCATCG ATGCGACCGG GCTCGGTCAG
GGCGTCTTCC AGCTCGTGCG CTCGTTCTAC CCGGCCGCGC GTGAAATCCG CTACACGCCG
GAAATGAAAA CCGCGATGGT GCTCAAAGCC AAAGACACCA TTCGCCGCGG TTGCCTCGAG
TACGACGTCA GCGCGACCGA TATCACGCAG TCGTTTATGT CTATCCGCAA AACCATGACC
AGCAGCGGGC GCAGCTCGAC TTATGAGGCC AGCCGCACAG AGGAAGCCAG TCACGCCGAT
CTCGCCTGGG CAACCATGCA CGTATTAATC AATGAGCCGC TGACCGCCGC GACCGGTGAA
CAGTCATCCA GCATCATGGA GTGGAACTAA
 
Protein sequence
MTTTNDTSLL SDPRRQAALL FWQGYSVPQI AEQLQVKRTT VQSWKQRDKW EETAPLNRVE 
FTLEARLIQL YAKPDLTAHD FKVADFLARQ MERLARVNRY GQTGNEADLN PNVANRNKGE
KKKPKKNFFS EEAIEKLEEI FLEQSFDYQL EWWRAGLAHR IRHILKSRQI GATFYFAREA
LLQALKTGHN QIFLSASKTQ AYVFRKYIIA FARQAGVELT GDPIVLGNNG AELMFLGTNA
NTAQSHNGDL YVDEIFWIPN FQKLKRVAGG MSSQEHLRTT YFSTPSSLAH GAYPFWSGEQ
FNKGRSDTSE RVDIDISHAA LAKGVACPDG QWRQIVTIED ALAKGCTLFN IDTLKRENSV
DEFRNLFMCE FVDDKASVFP FEELQRCMVD SLEKWEDYAP FADRPFGHRP VWIGYDPSLR
GDSAGCVVIA PPVVAGGKFR ILERHQWKGM DFAQQAESIR ELTQKYTVEY IGIDATGLGQ
GVFQLVRSFY PAAREIRYTP EMKTAMVLKA KDTIRRGCLE YDVSATDITQ SFMSIRKTMT
SSGRSSTYEA SRTEEASHAD LAWATMHVLI NEPLTAATGE QSSSIMEWN