| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4363 |
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| Symbol | |
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| ID | 6484199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4240381 |
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| End bp | 4241418 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642739605 |
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| Product | phage portal protein pbsx family |
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| Protein accession | YP_002043299 |
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| Protein GI | 194444567 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000000346537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAAGA AACGCAACAA GCGCCAGCAG CCGCCGCGCA CCCAAAACCA CACCGCCGCA
CCAGCGCAAA GCATGGAGGC ATTCACCTTT GGTGAGCCAA CGCCGGTACT CGACCGCCGC
GATATTCTCG ATTATGTCGA GTGTATCAAC AACGGCCAGT GGTACGAGCC GCCGGTGAGC
TTCTCCGGGC TGGCGAAAAG TATGCGCGCC GCCGTGCACC ACAGCTCACC GATTTACGTA
AAGCGTAATA TTCTGGTGTC GACCTACATC CCGCACCCGT TGTTATCCCG TCAGGACTTC
ACCCGGTTTG CGCTCGACTA TCTGGTGTTT GGCAATGCTT TTATCGAAGA GCGTCGCAGC
CTGACCGGCA AGCCGTTAAA ACTGGAAACC TCACCGGCGA AATACACCCG CCGTGGCATC
GAGGAGGACG TGTACTGGTA TATTCAGTCC TACACGCAGC CGCACCAGTT CGCGCCCGGC
TCCGTCTTCC ACCTGCTCGA GCCCGATATT AATCAGGAGC TTTACGGGAT GCCGGAATAC
CTGAGCGCAC TCAATTCAGC CTGGCTGAAT GAATCAGCGA CCCTGTTCCG TCGCAAGTAT
TACCAGAACG GCGCGCATGC GGGTTACATC ATGTATGTGA CCGACGCCGC GCAAAGCAGC
ACCGACGTCG AGGCACTGCG AAAGGCGATG CGCGACTCGA AAGGGCTCGG CAATTTTAAG
AACCTGTTTT TCTACGCCCC TAATGGTAAA GCAGACGGGA TTAAAATTGT GCCACTGAGC
GAAGTCGCCA CGAAGGATGA TTTTTTTAAT ATCAAGAAAG TCAGCGCCGC TGACCTGCTC
GACGCGCACC GCATCCCATT CCAGCTTATG GGCGGTAAGC CCGATAACGT CGGCTCAGTG
GGTGACGTTG AGAAGGTGGC AAAGGTCTTT GTACGTAACG AACTGACCCC GCTACAGGCG
CGGTTTATGG AGTTGAACGA GTGGGCGGGT GAAGAGATTA TCCGCTTCGA AAAATATAGC
CTCGGCGACG ACGAGTAA
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| Protein sequence | MSKKRNKRQQ PPRTQNHTAA PAQSMEAFTF GEPTPVLDRR DILDYVECIN NGQWYEPPVS
FSGLAKSMRA AVHHSSPIYV KRNILVSTYI PHPLLSRQDF TRFALDYLVF GNAFIEERRS
LTGKPLKLET SPAKYTRRGI EEDVYWYIQS YTQPHQFAPG SVFHLLEPDI NQELYGMPEY
LSALNSAWLN ESATLFRRKY YQNGAHAGYI MYVTDAAQSS TDVEALRKAM RDSKGLGNFK
NLFFYAPNGK ADGIKIVPLS EVATKDDFFN IKKVSAADLL DAHRIPFQLM GGKPDNVGSV
GDVEKVAKVF VRNELTPLQA RFMELNEWAG EEIIRFEKYS LGDDE
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