| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4348 |
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| Symbol | |
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| ID | 6486327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4231918 |
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| End bp | 4232898 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642739592 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | YP_002043286 |
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| Protein GI | 194446198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.175546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00000000567763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAATTA AGAAGCTCGA TGATGGTCGC TATGAAGTGG ACATTAGACC TCGCGGTCGC
GATGGAAAAC GCATCCGCAG GAAGTTTGAA AGAAAGGCTG AGGCGGTAGC ATTTGAGCGA
TACACCATCG CCAATGCCAG CCAGAAAGAA TGGGCAGGCC AGCGAGCAGA CCGTCGAACT
TTAGCGGAAT TGCTTGACGT CTGGTGGAAG TATCACGGTC AAAACCACGA ACACGGCACA
AAAGAGTTTA ATCACCTGCT CAAGACTATC AGCGGCATAG GTGATATGCC GGTGAGCCGG
GTGAGCAAAA GAGCTCTGAT GGATTATCGC TCTACGCGCC TGCGTGATGG CATCAGCGCC
GCGACGATAA ATCGTGACAT GTATCGCTTA TCGGGCATGT TCACCAAGCT AATCCAGTTG
GATGAGTTTT CCGGGCAACA TCCTATTCAC GGACTGCCGC CACTGGCGGA AGCCAACCCG
GAAATGACGT TTCTGGAGAA ATCAGAAATC GAGAAGCTGT TAAGCGTTTT GGTTGGTGAT
GACTTGCTGG TCGCGCTTTT GTGCCTGAGC ACAGGCGGAA GATGGACGGA AGTTGCCACA
CTGAAACCAG CGCAGATAAC AAGCTGCAGG GTTACCTTTT TGAAAACCAA AAACGGCAAA
AAGCGAACTG TGCCGATTTC TGCGGAACTG GAGAAAAAAG TTAAAGAGGA GGCTAGCGCT
AAATTGTTCA AGGTCGATTA TGAAAAGTTT TGCGGGATTT TACGCAGAGT GAAACCTGAC
ATACCACCCA ATCAGGCAAC TCACATCCTG CGACACACAT TCGCAAGTCA TTTCATGATG
AACGGGGGCA ACATAATTGC GCTGCAGCAG ATTCTCGGGC ATGCGAGCAT TCAGCAGACG
ATGGCCTACG CTCACCTTGC GCCTGACTAC CTGCAGAACG CCGTCGCACT GAATCCTCTT
AACGGTGGAG TGACGTTATA A
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| Protein sequence | MAIKKLDDGR YEVDIRPRGR DGKRIRRKFE RKAEAVAFER YTIANASQKE WAGQRADRRT
LAELLDVWWK YHGQNHEHGT KEFNHLLKTI SGIGDMPVSR VSKRALMDYR STRLRDGISA
ATINRDMYRL SGMFTKLIQL DEFSGQHPIH GLPPLAEANP EMTFLEKSEI EKLLSVLVGD
DLLVALLCLS TGGRWTEVAT LKPAQITSCR VTFLKTKNGK KRTVPISAEL EKKVKEEASA
KLFKVDYEKF CGILRRVKPD IPPNQATHIL RHTFASHFMM NGGNIIALQQ ILGHASIQQT
MAYAHLAPDY LQNAVALNPL NGGVTL
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