Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4342 |
Symbol | |
ID | 6484434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4227546 |
End bp | 4228235 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739586 |
Product | hypothetical protein |
Protein accession | YP_002043280 |
Protein GI | 194442873 |
COG category | [S] Function unknown |
COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0000280654 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATTATC CGGTTGACGT GTTTATTGGC AAAATTCGTG ACTATGACGG CAGCCGCCCG AGCGCTATCG CCAAGGTGCA AATCGACGGC GAACTCATGC TGACCGAGCT GGGTCTGGCA GGCGATCAGC AGGCCGAAAA GAAAATCCAC GGCGGCCCCG ACCGCGCGCT ATGCCATTAC CCCCGCGAAC ACTATGCTGA TTGGATTCGC CAGTTCCCCG AGCAGGCGAC GCTGTTTTGC GCCCCGGCGT TTGGCGAGAA TCTGTCGACG AACGGAATGA CCGAACACAA CGTGTTTATT GGCGACATCT ACCGCTGGGG CGAGGCGTTG ATCCAGGTCA CTCAGCCGCG CTCTCCATGC TTTAAACTTA ATTTCCACTT TGCCATCAGC GACATGGCCC TCCTTATGCA GAACAGCGGA AAAACCGGCT GGCTGTATCG GGTCATTGCG CCAGGTAAGG TCTCCAGCGA TGCGCCGCTG GAACTGGCGT CGCGTCTGAG CGATGTCTCG GTTCATGAAG CGGGTGTTAT CGCCTGGTCT ATGCCGTTTG ATGACGAACA ATATCACCGG CTGTTGAGCG CCGCCGGGCT GTCGGCGAGC TGGAGCCGCA CCATGCAAAA GCGTCGTTTG AGCGGCAAAA TTGAAGATAG CGTCAGACGA CTGTGGGGGG ATAAAACTCC GCCAAAATGA
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Protein sequence | MHYPVDVFIG KIRDYDGSRP SAIAKVQIDG ELMLTELGLA GDQQAEKKIH GGPDRALCHY PREHYADWIR QFPEQATLFC APAFGENLST NGMTEHNVFI GDIYRWGEAL IQVTQPRSPC FKLNFHFAIS DMALLMQNSG KTGWLYRVIA PGKVSSDAPL ELASRLSDVS VHEAGVIAWS MPFDDEQYHR LLSAAGLSAS WSRTMQKRRL SGKIEDSVRR LWGDKTPPK
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