Gene SNSL254_A4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4342 
Symbol 
ID6484434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4227546 
End bp4228235 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID642739586 
Producthypothetical protein 
Protein accessionYP_002043280 
Protein GI194442873 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000280654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTATC CGGTTGACGT GTTTATTGGC AAAATTCGTG ACTATGACGG CAGCCGCCCG 
AGCGCTATCG CCAAGGTGCA AATCGACGGC GAACTCATGC TGACCGAGCT GGGTCTGGCA
GGCGATCAGC AGGCCGAAAA GAAAATCCAC GGCGGCCCCG ACCGCGCGCT ATGCCATTAC
CCCCGCGAAC ACTATGCTGA TTGGATTCGC CAGTTCCCCG AGCAGGCGAC GCTGTTTTGC
GCCCCGGCGT TTGGCGAGAA TCTGTCGACG AACGGAATGA CCGAACACAA CGTGTTTATT
GGCGACATCT ACCGCTGGGG CGAGGCGTTG ATCCAGGTCA CTCAGCCGCG CTCTCCATGC
TTTAAACTTA ATTTCCACTT TGCCATCAGC GACATGGCCC TCCTTATGCA GAACAGCGGA
AAAACCGGCT GGCTGTATCG GGTCATTGCG CCAGGTAAGG TCTCCAGCGA TGCGCCGCTG
GAACTGGCGT CGCGTCTGAG CGATGTCTCG GTTCATGAAG CGGGTGTTAT CGCCTGGTCT
ATGCCGTTTG ATGACGAACA ATATCACCGG CTGTTGAGCG CCGCCGGGCT GTCGGCGAGC
TGGAGCCGCA CCATGCAAAA GCGTCGTTTG AGCGGCAAAA TTGAAGATAG CGTCAGACGA
CTGTGGGGGG ATAAAACTCC GCCAAAATGA
 
Protein sequence
MHYPVDVFIG KIRDYDGSRP SAIAKVQIDG ELMLTELGLA GDQQAEKKIH GGPDRALCHY 
PREHYADWIR QFPEQATLFC APAFGENLST NGMTEHNVFI GDIYRWGEAL IQVTQPRSPC
FKLNFHFAIS DMALLMQNSG KTGWLYRVIA PGKVSSDAPL ELASRLSDVS VHEAGVIAWS
MPFDDEQYHR LLSAAGLSAS WSRTMQKRRL SGKIEDSVRR LWGDKTPPK