| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4329 |
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| Symbol | rhaA |
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| ID | 6482580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4216368 |
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| End bp | 4217627 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642739573 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_002043267 |
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| Protein GI | 194443942 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.103979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AACTGGAACA AGCCTGGGAA CTGGCAAAAC AACGTTTCGC CGCAGTAGGT
ATTGATATCG AGGAGGCGCT GCGCCAGCTC GATCGCCTGC CGGTTTCCAT GCACTGCTGG
CAGGGCGACG ATGTTGCCGG ATTCGAGAAC CCGGAAGGTT CGCTGACGGG CGGAATTCAA
TCGACCGGCA ACTATCCGGG CAAAGCGCGT AACGCCACCG AACTGCGCGC CGATCTGGAA
CAGGCGCTGC GTCTGATCCC AGGCCCAAAA CGGCTGAACC TACACGCCAT TTACCTTGAG
TCGGATACGC CGGTTGCTCG CGACCAGATC AAACCGGAGC ATTTTAAAAA CTGGGTGGAG
TGGGCGAAAG CGAACCGGCT GGGGCTGGAT TTCAACCCCA CCTGTTTTTC TCATCCACTG
AGCGCTGACG GTTTTACCCT CTCTCATCCA GACGCGAAAA TTCGCCAGTT CTGGATCGAT
CACTGCAAAG CCAGCCGCCG CGTCTCGGCA TACTTTGGTG AGCAGCTCGG TACGCCGTCG
GTGATGAACA TCTGGATTCC GGACGGCATG AAAGACATTA CCGTCGACCG TTTAGCCCCG
CGCCAGCGCC TGCTGGAAGC GCTGGATGAG GTCATTAGCG AGAAATTCGA CCCGGCGCAC
CACATCGACG CCGTTGAGAG CAAACTGTTT GGCATCGGCG CGGAAAGCTA CACCGTCGGC
TCCAATGAGT TCTACATGGG CTACGCCACC AGCCGTCAGA CCGCGCTGTG CCTGGATGCG
GGCCACTTCC ATCCCACTGA AGTGATTTCC GACAAAATTT CCGCCGCCAT GCTCTACGTG
CCACGGCTGC TGCTGCACGT CAGCCGCCCG GTACGCTGGG ATAGCGACCA CGTGGTACTC
CTGGACGATG AAACCCAGGC AATTGCCAGC GAAATCGTCC GTCATAACCT GTTCGACCGT
GTGCATATCG GTCTGGATTT CTTCGACGCC TCTATCAACC GTGTCGCCGC GTGGGTTATC
GGTACCCGCA ACATGAAAAA AGCGCTGCTG CGCGCTCTGC TGGAACCCAC AGATCAACTG
CGTCAGCTTG AGGCCAGCGG CGATTACACC GCGCGTCTGG CGCTGCTGGA AGAGCAAAAA
TCTCTGCCGT GGCAGGCCGT CTGGGAAATG TATTGCCAGC GTCACGACAC GCCGGCTGGC
AGCCAGTGGC TGGACAGCGT TCGCGCCTAC GAAAAAGAGA TCCTGAGCAA ACGTAGCTGA
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| Protein sequence | MTTQLEQAWE LAKQRFAAVG IDIEEALRQL DRLPVSMHCW QGDDVAGFEN PEGSLTGGIQ
STGNYPGKAR NATELRADLE QALRLIPGPK RLNLHAIYLE SDTPVARDQI KPEHFKNWVE
WAKANRLGLD FNPTCFSHPL SADGFTLSHP DAKIRQFWID HCKASRRVSA YFGEQLGTPS
VMNIWIPDGM KDITVDRLAP RQRLLEALDE VISEKFDPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PRLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIVRHNLFDR VHIGLDFFDA SINRVAAWVI GTRNMKKALL RALLEPTDQL
RQLEASGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPAG SQWLDSVRAY EKEILSKRS
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