| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4328 |
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| Symbol | rhaD |
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| ID | 6483083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4215398 |
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| End bp | 4216225 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642739572 |
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| Product | rhamnulose-1-phosphate aldolase |
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| Protein accession | YP_002043266 |
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| Protein GI | 194442457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.187622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA TTACCGATTC CTGGTTTGTC CAGGGCATGA TTAAAGCCAC GTCTGATGCG
TGGCTGAAAG GGTGGGACGA ACGTAATGGC GGTAACCTGA CGCTGCGTCT GGATGAAGCC
GATATCGCAC CGTTTGCAGC TAATTTCCAC GAAAAACCGC GCTACATCGC GCTAAGTCAA
CCCATGCCGC TGCTGGCGAA CACGCCGTTT ATTGTCACCG GTTCCGGCAA ATTCTTTCGC
AACGTGCAGC TCGATCCGGC AGCCAATTTA GGCGTGGTCA AAATCGACAG CGACGGCGCA
GGCTACCACA TTCTGTGGGG CTTAACCCAC GACGCGGTAC CCACCTCTGA ACTCCCGGCG
CATTTCCTCT CCCACTGCGA ACGCATCAAA GCCACCCACG GCAAAGACCG CGTCATTATG
CATTGCCATG CGACTAACCT GATCGCCCTC ACCTACGTAC TGGAAAACAA CACTGCGCTG
ATCACCCGCA AACTGTGGGA AGGCAGCACC GAATGCCTGG TGGTATTCCC GGACGGTGTC
GGCATTCTGC CATGGATGGT GCCAGGCACC GATGAAATCG GCCAGGCCAC CGCGCAAGAA
ATGCAGAAAC ATTCGCTGGT ACTGTGGCCG TTCCACGGCG TGTTCGGAAG CGGACCTACG
CTGGATGAAA CCTTCGGTTT GATAGATACC GCAGAGAAAT CCGCTGAGGT ATTAGTCAAA
ATCTATTCGA TGGGCGGTAT GAAGCAGACC ATCACGCGCG AAGAACTGGT CGCACTCGGC
AAACGTTTTG GTGTGACACC GCTGGCCAGC GCCGTAGCGC TGTACTGA
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| Protein sequence | MQNITDSWFV QGMIKATSDA WLKGWDERNG GNLTLRLDEA DIAPFAANFH EKPRYIALSQ
PMPLLANTPF IVTGSGKFFR NVQLDPAANL GVVKIDSDGA GYHILWGLTH DAVPTSELPA
HFLSHCERIK ATHGKDRVIM HCHATNLIAL TYVLENNTAL ITRKLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAEVLVK
IYSMGGMKQT ITREELVALG KRFGVTPLAS AVALY
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