Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4316 |
Symbol | fdoH |
ID | 6485993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4204171 |
End bp | 4205073 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642739562 |
Product | formate dehydrogenase-O, iron-sulfur subunit |
Protein accession | YP_002043256 |
Protein GI | 194442665 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTATC AATCGCAAGA CATCATTCGT CGTTCCGCCA CTAACGGTTT CACCCCCGCG CCCCAGGCGC GGGACCACCA GGAAGAGGTG GCGAAACTCA TCGACGTCAC CACCTGTATC GGCTGTAAAG CGTGTCAGGT GGCGTGCTCC GAGTGGAACG ACATCCGTGA TGAAGTGGGC AATAACGTCG GGGTGTATGA CAACCCGGCG GACTTAACCG CGAAATCCTG GACGGTGATG CGCTTCTCGG AAGTGGAACA GAACGACAAA CTGGAGTGGC TGATCCGTAA GGATGGCTGT ATGCACTGCG CCGATCCAGG CTGCCTGAAG GCCTGTCCGG CGGAAGGGGC GATCATTCAG TACGCTAACG GTATTGTCGA CTTCCAGTCC GAGCAGTGTA TCGGCTGCGG CTACTGTATC GCTGGCTGCC CGTTCAACGT GCCGCGCCTT AACCCGGAAG ACAACCGCGT CTATAAATGT ACGCTGTGCG TCGACCGTGT GGTGGTCGGC CAAGAACCGG CCTGCGTGAA GACCTGTCCA ACCGGCGCCA TTCATTTTGG CTCGAAAGAG GATATGAAAA CGCTGGCGGG CGAGCGGGTG GCGGAACTCA AAACCCGTGG TTATGACAAC GCGGGTCTGT ACGATCCGGC GGGCGTAGGC GGTACGCATG TCATGTACGT GCTGCATCAT GCCGACAAGC CGAATCTGTA TCACGGTCTG CCGGAGAACC CGGAAATCAG CGAAACCGTT AAGTTCTGGA AAGGCGTCTG GAAACCGCTC GCCGCGTTCG GTTTTGCCGC GACCTTTGCC GCCAGCGTCT TCCACTATGT TGGCGTCGGC CCGAACCGCG CGGAAGAGGA AGATGACAAC CTGCATGAAG AGAAAGACGA GGTGCGCAAA TGA
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Protein sequence | MAYQSQDIIR RSATNGFTPA PQARDHQEEV AKLIDVTTCI GCKACQVACS EWNDIRDEVG NNVGVYDNPA DLTAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCADPGCLK ACPAEGAIIQ YANGIVDFQS EQCIGCGYCI AGCPFNVPRL NPEDNRVYKC TLCVDRVVVG QEPACVKTCP TGAIHFGSKE DMKTLAGERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL PENPEISETV KFWKGVWKPL AAFGFAATFA ASVFHYVGVG PNRAEEEDDN LHEEKDEVRK
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