Gene SNSL254_A4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4316 
SymbolfdoH 
ID6485993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4204171 
End bp4205073 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID642739562 
Productformate dehydrogenase-O, iron-sulfur subunit 
Protein accessionYP_002043256 
Protein GI194442665 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATC AATCGCAAGA CATCATTCGT CGTTCCGCCA CTAACGGTTT CACCCCCGCG 
CCCCAGGCGC GGGACCACCA GGAAGAGGTG GCGAAACTCA TCGACGTCAC CACCTGTATC
GGCTGTAAAG CGTGTCAGGT GGCGTGCTCC GAGTGGAACG ACATCCGTGA TGAAGTGGGC
AATAACGTCG GGGTGTATGA CAACCCGGCG GACTTAACCG CGAAATCCTG GACGGTGATG
CGCTTCTCGG AAGTGGAACA GAACGACAAA CTGGAGTGGC TGATCCGTAA GGATGGCTGT
ATGCACTGCG CCGATCCAGG CTGCCTGAAG GCCTGTCCGG CGGAAGGGGC GATCATTCAG
TACGCTAACG GTATTGTCGA CTTCCAGTCC GAGCAGTGTA TCGGCTGCGG CTACTGTATC
GCTGGCTGCC CGTTCAACGT GCCGCGCCTT AACCCGGAAG ACAACCGCGT CTATAAATGT
ACGCTGTGCG TCGACCGTGT GGTGGTCGGC CAAGAACCGG CCTGCGTGAA GACCTGTCCA
ACCGGCGCCA TTCATTTTGG CTCGAAAGAG GATATGAAAA CGCTGGCGGG CGAGCGGGTG
GCGGAACTCA AAACCCGTGG TTATGACAAC GCGGGTCTGT ACGATCCGGC GGGCGTAGGC
GGTACGCATG TCATGTACGT GCTGCATCAT GCCGACAAGC CGAATCTGTA TCACGGTCTG
CCGGAGAACC CGGAAATCAG CGAAACCGTT AAGTTCTGGA AAGGCGTCTG GAAACCGCTC
GCCGCGTTCG GTTTTGCCGC GACCTTTGCC GCCAGCGTCT TCCACTATGT TGGCGTCGGC
CCGAACCGCG CGGAAGAGGA AGATGACAAC CTGCATGAAG AGAAAGACGA GGTGCGCAAA
TGA
 
Protein sequence
MAYQSQDIIR RSATNGFTPA PQARDHQEEV AKLIDVTTCI GCKACQVACS EWNDIRDEVG 
NNVGVYDNPA DLTAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCADPGCLK ACPAEGAIIQ
YANGIVDFQS EQCIGCGYCI AGCPFNVPRL NPEDNRVYKC TLCVDRVVVG QEPACVKTCP
TGAIHFGSKE DMKTLAGERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL
PENPEISETV KFWKGVWKPL AAFGFAATFA ASVFHYVGVG PNRAEEEDDN LHEEKDEVRK