Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4315 |
Symbol | fdoI |
ID | 6486561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4203539 |
End bp | 4204174 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739561 |
Product | formate dehydrogenase-O subunit gamma |
Protein accession | YP_002043255 |
Protein GI | 194445936 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC GTGACACCAT CGTGCGCTAT ACGGCGCCGG AACGCATCAA CCACTGGATC GTCGCCTTCT GCTTCGTGCT GGCGGCGGTG AGCGGGCTGG GCTTTTTATT CCCATCCTTC AACTGGTTGA TGCATATCCT GGGCACCCCA CAACTGGCGC GAATTCTGCA CCCGTTTGTG GGCGTGGTTA TGTTTGCCTC GTTCATCATC ATGTTTTTCC GTTATTGGCA CCACAATCTA ATCAATCGGG ATGATATCTT TTGGGCGAAG AATATTCGTA AGATCGTCGT CAACGAGGAA GTGGGTGACA CCGGGCGTTA TAACTTCGGT CAGAAATGCG TATTCTGGGC GGCGATTATC TTCCTGGTGC TGCTGCTGGT GAGCGGGGTA ATTATCTGGC GTCCGTACTT TGCGCCTGCT TTCTCAATCC CGGTGATCCG ATTCGCGTTA ATGTTGCATT CTTTTGCCGC AGTAGCGTTA ATTGTGGTTA TCATGGTGCA TATCTACGCC GCCCTTTGGG TGAAAGGCAC CATTACCGCG ATGGTGGAAG GCTGGGTAAC CCGGTCGTGG GCGAAGAAGC ATCACCCGCG CTGGTACCGA GAAGTCCGCA AGACAACGGA AAAAGAAACT GAATGA
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Protein sequence | MKRRDTIVRY TAPERINHWI VAFCFVLAAV SGLGFLFPSF NWLMHILGTP QLARILHPFV GVVMFASFII MFFRYWHHNL INRDDIFWAK NIRKIVVNEE VGDTGRYNFG QKCVFWAAII FLVLLLVSGV IIWRPYFAPA FSIPVIRFAL MLHSFAAVAL IVVIMVHIYA ALWVKGTITA MVEGWVTRSW AKKHHPRWYR EVRKTTEKET E
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