Gene SNSL254_A4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4315 
SymbolfdoI 
ID6486561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4203539 
End bp4204174 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content53% 
IMG OID642739561 
Productformate dehydrogenase-O subunit gamma 
Protein accessionYP_002043255 
Protein GI194445936 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC GTGACACCAT CGTGCGCTAT ACGGCGCCGG AACGCATCAA CCACTGGATC 
GTCGCCTTCT GCTTCGTGCT GGCGGCGGTG AGCGGGCTGG GCTTTTTATT CCCATCCTTC
AACTGGTTGA TGCATATCCT GGGCACCCCA CAACTGGCGC GAATTCTGCA CCCGTTTGTG
GGCGTGGTTA TGTTTGCCTC GTTCATCATC ATGTTTTTCC GTTATTGGCA CCACAATCTA
ATCAATCGGG ATGATATCTT TTGGGCGAAG AATATTCGTA AGATCGTCGT CAACGAGGAA
GTGGGTGACA CCGGGCGTTA TAACTTCGGT CAGAAATGCG TATTCTGGGC GGCGATTATC
TTCCTGGTGC TGCTGCTGGT GAGCGGGGTA ATTATCTGGC GTCCGTACTT TGCGCCTGCT
TTCTCAATCC CGGTGATCCG ATTCGCGTTA ATGTTGCATT CTTTTGCCGC AGTAGCGTTA
ATTGTGGTTA TCATGGTGCA TATCTACGCC GCCCTTTGGG TGAAAGGCAC CATTACCGCG
ATGGTGGAAG GCTGGGTAAC CCGGTCGTGG GCGAAGAAGC ATCACCCGCG CTGGTACCGA
GAAGTCCGCA AGACAACGGA AAAAGAAACT GAATGA
 
Protein sequence
MKRRDTIVRY TAPERINHWI VAFCFVLAAV SGLGFLFPSF NWLMHILGTP QLARILHPFV 
GVVMFASFII MFFRYWHHNL INRDDIFWAK NIRKIVVNEE VGDTGRYNFG QKCVFWAAII
FLVLLLVSGV IIWRPYFAPA FSIPVIRFAL MLHSFAAVAL IVVIMVHIYA ALWVKGTITA
MVEGWVTRSW AKKHHPRWYR EVRKTTEKET E