Gene SNSL254_A4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4308 
Symbol 
ID6484634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4199977 
End bp4200405 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID642739554 
Producthypothetical protein 
Protein accessionYP_002043248 
Protein GI194446448 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAA CCAGCGCAAA AAAGATCGTT GATACCTTCA GCGATGCGGT AAAAACCGTC 
CCACTGATGG GGGAAGACCG AAATGACAAT GAGTATCGCA GGGCACTAGC GCTAGTGGAG
TTTCTGGTCG ACCACGACGA TCTTGAAAAC CCACTATTTG AATTGCTCTG TGCCCGAATC
AGTGAATACG AAAAACATGC GCCGGAATTC AAAGCACTCA ACCAACACCT GGAGAAAACG
CCCCCTGGCG TTTCAGTATT GCGAACGCTC ATGGATCAAT ACGGTCTCAA AGCAGCAGAT
CTTGCCAACG AACTTGGTTC TAAATCGAAC GTCAGCAACA TCTTAAATGG CCGCAGAGCA
CTAACGGTTA ATCATATTAA AGCGCTTACA CAACGCTTCA AACTACCAGC AGATGCCTTC
ATCGAGTAG
 
Protein sequence
MDATSAKKIV DTFSDAVKTV PLMGEDRNDN EYRRALALVE FLVDHDDLEN PLFELLCARI 
SEYEKHAPEF KALNQHLEKT PPGVSVLRTL MDQYGLKAAD LANELGSKSN VSNILNGRRA
LTVNHIKALT QRFKLPADAF IE