Gene SNSL254_A4304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4304 
SymbolyihX 
ID6484413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4197077 
End bp4197676 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content51% 
IMG OID642739550 
Productphosphatase 
Protein accessionYP_002043244 
Protein GI194445145 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.766315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACA TCTTTGATTT AGGTAATGTG ATTGTCGACA TCGACTTTAA CCGCGTATTA 
GGTGTGTGGA GCGACCTGAG TCGAGTACCG CTGGCTTCGC TGAAGCAAAA ATTTACGATG
GGCGAGACTT TTCACCAACA TGAACGCGGT GAGATAACGG ACGAAGCGTT TGCTGAAGCT
TTCTGTCATG AAATGGCGTT ATCGCTCAGT TATGAACAAT TTGCACACGG CTGGCAGGCG
GTATTTGTCG GGTTACGGCC CGAAGTGATT GCTATCATGC ATAAACTGCG CGAGCAGGGG
CATCGCGTGG TGGTGCTATC CAATACTAAC CGACTGCATA CCCACTTCTG GCCGGAGGAA
TACCCGGAGG TGCGCGCTGC CGCCGACCAT ATCTATTTAT CGCAGGACTT GGGAATGCGT
AAGCCGGAAG CGCGTATTTA TCAGCACGTC CTGCAGAAAG AAGGTTTTTC CGCTGCCGAT
GCGGTCTTTT TCGACGACAA TGCCGATAAT ATAGAAGGGG CCAACCAGTT GGGGATCACC
AGCATTCTGG TGAAGGATAA AGCCACCATC CCTGACTATT TCGCGAAGCT GTTATGCTAA
 
Protein sequence
MLYIFDLGNV IVDIDFNRVL GVWSDLSRVP LASLKQKFTM GETFHQHERG EITDEAFAEA 
FCHEMALSLS YEQFAHGWQA VFVGLRPEVI AIMHKLREQG HRVVVLSNTN RLHTHFWPEE
YPEVRAAADH IYLSQDLGMR KPEARIYQHV LQKEGFSAAD AVFFDDNADN IEGANQLGIT
SILVKDKATI PDYFAKLLC