Gene SNSL254_A4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4292 
SymbolompL 
ID6482676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4184184 
End bp4184876 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content40% 
IMG OID642739538 
Productouter membrane porin L 
Protein accessionYP_002043232 
Protein GI194443106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0957036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC TGAATACTCT AGTGATATTA ACTTCTGTAA TATCCACCTC TGTTTTTGCT 
GGCGCTTATG TAGAAAACCG TGAGGCCTAT AACCTGGCGT CTGACCAAAT GGAGTTTATG 
CTGCGCGTCG GCTATAACTC CGATATGGGG GCCGGAATTA TGTTGACCAA TACCTATACG 
CTACAGCGTG ATAATGAATT AAAGCACGGT TATAATGAGA TTGAGGGCTG GTATCCGTTA 
TTTAAACCTA CAGATAAATT AACCATCCAG CCTGGCGGGT TAATAAACGA CAAAAGCATT 
GGTTCCGGCG GCGCCGTCTA TCTGGATGTT AACTATAAAT TTACCCCGTG GTTTAATCTT 
ACGGTACGTA ACCGATATAA TCACAATAAT TATAGTTCAA CCGATTTGAA TGGCGAACTG 
GATAATAATG ACAGCTATGA AATCGGTAAC TATTGGAATT TTATCATTAC CGATAAATTT 
TCTTATACCT TTGAACCACA CTATTTTTAT AACGTTAATG ATTTTAATAG TAGTAATGGT 
ACGAAGCATC ATTGGGAAAT CACTAATACC TTCCGTTATC GTATCAATGA ACACTGGTTG 
CCCTACTTTG AATTACGCTG GTTAGATCGT AACGTGGGCC CCTACCATAG AGAGCAAAAC 
CAGATTCGTA TCGGGGCGAA GTATTTCTTC TGA
 
Protein sequence
MKSLNTLVIL TSVISTSVFA GAYVENREAY NLASDQMEFM LRVGYNSDMG AGIMLTNTYT 
LQRDNELKHG YNEIEGWYPL FKPTDKLTIQ PGGLINDKSI GSGGAVYLDV NYKFTPWFNL 
TVRNRYNHNN YSSTDLNGEL DNNDSYEIGN YWNFIITDKF SYTFEPHYFY NVNDFNSSNG 
TKHHWEITNT FRYRINEHWL PYFELRWLDR NVGPYHREQN QIRIGAKYFF