Gene SNSL254_A4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4285 
Symbol 
ID6486967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4175053 
End bp4175568 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID642739531 
Producthypothetical protein 
Protein accessionYP_002043225 
Protein GI194445363 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0130421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC CAACCTCTGC ACCGCGCAGT AAAGCCTTTG GCAAACAGCG TCGTAAAACG 
CGTGAAGAGT TAAACCAGGA GGCGCGCGAC CGTAAACGCC TGAAAAAACA TCGCGGTCAT
GCGCCGGGAA GTCGCGCGGC GGGCGGCAAT TCCGCTTCGG GCGGCGGCAA TCAGAATCAA
CAAAAAGATC CACGTATTGG CAGTAAAACA CCTGTTCCAT TGGGCGTGAC TGAAAAAGTG
ACCCAACAGC ATAAACCGAA AAGTGAGAAA CCTATGCTTT CACCGCAGGC GGAGTTGGAT
TTACTGGAAA CGGATGAGCG CCTGGATGCG CTGTTAGAAC GTCTGGAAGC GGGCGAAACC
CTGAGTGCGG AAGATCAAGC CTGGGTAGAT GCCAAACTGG ATCGTATTGA TGAACTGATG
CAGAAGCTTG GTCTGTCTTA CGATGACGAC GAAGAAGACG ACGAAGAGGA CGAGAAGCAG
GAAGATATGA TGCGCCTGCT AAGAGGCGGC AACTAA
 
Protein sequence
MKKPTSAPRS KAFGKQRRKT REELNQEARD RKRLKKHRGH APGSRAAGGN SASGGGNQNQ 
QKDPRIGSKT PVPLGVTEKV TQQHKPKSEK PMLSPQAELD LLETDERLDA LLERLEAGET
LSAEDQAWVD AKLDRIDELM QKLGLSYDDD EEDDEEDEKQ EDMMRLLRGG N