| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4240 |
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| Symbol | rhtB |
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| ID | 6486132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4129888 |
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| End bp | 4130508 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739491 |
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| Product | homoserine/homoserine lactone efflux protein |
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| Protein accession | YP_002043190 |
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| Protein GI | 194445576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.119305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTTG AATGGTGGTT CGCCTATCTA CTGACCTCAA CTCTGCTGAG TCTTTCTCCG
GGTTCAAGCG CCATCAATAC CATGACGACG TCTATCAACC ATGGATATCG TGGCGCAGTG
GCTTCTATCG CCGGACTCCA GACCGGGCTG GGAATACATA TCGTACTGGT GGGCGTCGGA
CTGGGTACGC TCTTTTCGCG CTCGCTCCTC GCTTTTGAAA TTCTGAAATG GGCTGGCGCG
GCTTATCTTA TCTGGCTGGG TATCCAGCAA TGGCGCGCCG CAGGCGCTAT CGATCTGCAT
ACCCTCGCCC AGACGCAATC GCGGGGTCGG CTGTTCAAAC GGGCGATATT TGTCAATCTA
ACCAATCCCA AAAGTATTGT CTTTCTTGCC GCCCTGTTTC CGCAATTCAT CATGCCGCAG
CAACCGCAAC TGGCGCAGTA CCTCATTCTC GGCGTCACTA CGATTGTGGT GGATATGATT
GTGATGACCG GTTACGCCAC GCTGGCGCAG CGCATTGCCG CCTGGATTAA AGGACCAAAG
CAGATGAAGG CGCTGAATAA AGCGTTTGGT TCGTTGTTTA TGCTGGTAGG CGCGCTCCTG
GCGTCGGCAA GACACGCGTG A
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| Protein sequence | MTFEWWFAYL LTSTLLSLSP GSSAINTMTT SINHGYRGAV ASIAGLQTGL GIHIVLVGVG
LGTLFSRSLL AFEILKWAGA AYLIWLGIQQ WRAAGAIDLH TLAQTQSRGR LFKRAIFVNL
TNPKSIVFLA ALFPQFIMPQ QPQLAQYLIL GVTTIVVDMI VMTGYATLAQ RIAAWIKGPK
QMKALNKAFG SLFMLVGALL ASARHA
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