Gene SNSL254_A4238 details

Gene Information

• Locus tag: SNSL254_A4238
• Symbol: recQ
• ID: 6486053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 4127317
• End bp: 4129164
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642739489
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_002043188
• Protein GI: 194446579
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 68
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTGAACG GGGTTAATGT GGCGCAGGCG GAAGTGTTGA ATCTGGAATC AGGGGCCAAA 
CAGGTTTTGC AGGAAACCTT TGGCTACCAA CAGTTTCGCC CGGGCCAGGA AGCGATTATT 
GATACTGCGC TCTCCGGTCG CGACTGTCTG GTCGTCATGC CCACCGGCGG CGGCAAATCT 
CTGTGCTATC AAATCCCCGC GTTGTTGCTG GACGGATTGA CCGTCGTCGT TTCGCCCCTG 
ATCTCGTTGA TGAAAGACCA GGTCGATCAG CTACTGGCGA ACGGGGTGGC GGCGGCGTGC 
CTGAACTCCA CTCAAAGCCG CGAGCAGCAG CTTGAGGTGA TGGCGGGGTG CCGTACCGGA 
CAGATTCGTC TGCTGTATAT TGCGCCGGAA CGCCTGATGC TGGACAACTT TCTTGATCAT 
CTGGCGCACT GGAATCCGGT ATTGCTGGCG GTGGATGAAG CGCACTGTAT CTCGCAGTGG 
GGACATGATT TCCGTCCGGA ATATGCGGCT CTCGGTCAGC TTCGCCAGCG TTTTCCCGCT 
TTGCCGTTTA TGGCATTGAC CGCCACCGCC GACGACACCA CGCGCCAGGA TATTATTCGT 
CTGCTTGGGC TTAACGATCC GTTAATCCAG ATCAGTAGCT TTGACCGACC GAATATCCGC 
TACATGCTGA TGGAGAAGTT TAAGCCGCTC GACCAGCTAA TGCGCTATGT TCAGGAGCAA 
CGCGGCAAAT CGGGTATCAT CTACTGCAAC AGTCGGGCGA AAGTGGAAGA TACCGCCGCG 
CGCTTGCAAA GTCGCGGCAT TAGCGCGGCG GCCTATCATG CGGGGCTGGA AAACGCTATT 
CGCGCCGATG TGCAGGAAAA ATTTCAGCGC GACGATCTGC AAATCGTGGT GGCGACAGTC 
GCTTTTGGAA TGGGCATAAA CAAACCTAAC GTACGTTTCG TCGTGCATTT CGATATCCCG 
CGCAATATTG AATCCTACTA TCAGGAAACG GGCCGCGCCG GGCGCGACGG ACTGCCTGCG 
GAAGCCATGC TATTTTACGA TCCGGCTGAT ATGGCCTGGC TACGTCGTTG TCTGGAAGAG 
AAACCAGCCG GACAGCTTCA GGATATTGAA CGGCATAAAC TGAATGCGAT GGGCGCTTTT 
GCCGAAGCGC AGACCTGCCG CCGCCTGGTA TTACTTAATT ACTTTGGCGA AGGCCGACAA 
GAACCGTGCG GCAACTGCGA TATCTGTCTC GATCCGCCCA AACAATATGA TGGCTTAAAC 
GATGCCCAGA TTGCGCTTTC TACCATTGGT CGGGTTAACC AGCGTTTTGG CATGGGCTAC 
GTTGTCGAGG TGATCCGCGG CGCGAATAAC CAACGCATCC GCGATTTCGG TCATGACAAA 
CTCAAGGTTT ATGGCATGGG ACGCGAAAAG AGCCATGAGC ACTGGGTGAG CGTGATTCGC 
CAGCTCATTC ATCTGGGGCT GGTAATGCAA AATATTGCGC AGCACTCCGC ATTACAGTTG 
ACGGATGCCG CGCGTCCGGT ACTCCGTGGA GACGTTCCGC TAAAGCTTGC GGTGCCGCGC 
ATCGTCGCCC TCAAACCCCG CGTGATGCAG AAATCGTTCG GCGGTAATTA CGATCGCAAA 
TTGTTCGCTA AGTTGCGCAA GTTGCGTAAA GCTATCGCTG ATGAAGAGAA TATCCCGCCG 
TATGTGGTCT TTAACGACGC CACGTTGATA GAAATGGCGG AACAGATGCC GGTTTCCGCC 
AGCGAGATGT TAAGCGTTAA CGGGGTTGGG ATGCGCAAAC TGGAGCGCTT CGGGAAAGAA 
TTTATGGCGC TCATCCGCGC GCATGTCGAT GGTGATGACG AAGAGTAG 

 

Protein sequence

MVNGVNVAQA EVLNLESGAK QVLQETFGYQ QFRPGQEAII DTALSGRDCL VVMPTGGGKS 
LCYQIPALLL DGLTVVVSPL ISLMKDQVDQ LLANGVAAAC LNSTQSREQQ LEVMAGCRTG 
QIRLLYIAPE RLMLDNFLDH LAHWNPVLLA VDEAHCISQW GHDFRPEYAA LGQLRQRFPA 
LPFMALTATA DDTTRQDIIR LLGLNDPLIQ ISSFDRPNIR YMLMEKFKPL DQLMRYVQEQ 
RGKSGIIYCN SRAKVEDTAA RLQSRGISAA AYHAGLENAI RADVQEKFQR DDLQIVVATV 
AFGMGINKPN VRFVVHFDIP RNIESYYQET GRAGRDGLPA EAMLFYDPAD MAWLRRCLEE 
KPAGQLQDIE RHKLNAMGAF AEAQTCRRLV LLNYFGEGRQ EPCGNCDICL DPPKQYDGLN 
DAQIALSTIG RVNQRFGMGY VVEVIRGANN QRIRDFGHDK LKVYGMGREK SHEHWVSVIR 
QLIHLGLVMQ NIAQHSALQL TDAARPVLRG DVPLKLAVPR IVALKPRVMQ KSFGGNYDRK 
LFAKLRKLRK AIADEENIPP YVVFNDATLI EMAEQMPVSA SEMLSVNGVG MRKLERFGKE 
FMALIRAHVD GDDEE