Gene SNSL254_A4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4230 
Symbol 
ID6485881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4119444 
End bp4120160 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content56% 
IMG OID642739481 
Productflavin mononucleotide phosphatase 
Protein accessionYP_002043180 
Protein GI194443889 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT ACCGGCCTTT GGGGCGTATT GCCGCGCTCA CCTTTGACCT GGATGATACC 
CTTTATGATA ACCGTCCGGT GATTTTGCGT ACTGAGCAGG AAGCGCTCGC TTTTATGCAA
AATTATCACC CGTCGCTACG TTCGTTTCAA AACGTCGATT TACAGCGGAT ACGGCAGGCG
GTGCGTGAAG CGGAGCCGGA AATCTATCAT GACGTTACCC GCTGGCGCCA TCGCGCGATA
GAGCAGGCCA TGCGGGATGC GGGATTATCG GCGCAGGAGG CCATTGCCGG CGCGAATGCG
GCGATGATGC ATTTTGCCAA ATGGCGCAGC CAGATTGAGG TTCCGCAGGC TACCCATGAG
ACGTTACAGC AGCTTGCGAA AAAATGGCCG CTGGTGGCGA TCACTAACGG CAACGCCCAG
CCGGAACTGT TTGGCCTCGG CGATTACTTT AAGTTTGTAC TGCGCGCCGG CCCGGATGGA
CGTTCCAAGC CGTTTAGCGA CATGTATTTC CTGGCGGCGG AAAAGCTGCA TGTGCCGATC
GGCGAGATCC TGCATGTCGG CGATGATCTG ACTACCGATG TGGCTGGCGC TATTCGCTGT
GGGATGCAGG CCTGCTGGAT TAAACCTGAA AATGCCGACC TGATGCGGAC GCAAGACAGC
CGTTTACTGC CGCATATCGA AATTTCGCGG TTGGCATCTC TCACCTCGCT GATATAA
 
Protein sequence
MRFYRPLGRI AALTFDLDDT LYDNRPVILR TEQEALAFMQ NYHPSLRSFQ NVDLQRIRQA 
VREAEPEIYH DVTRWRHRAI EQAMRDAGLS AQEAIAGANA AMMHFAKWRS QIEVPQATHE
TLQQLAKKWP LVAITNGNAQ PELFGLGDYF KFVLRAGPDG RSKPFSDMYF LAAEKLHVPI
GEILHVGDDL TTDVAGAIRC GMQACWIKPE NADLMRTQDS RLLPHIEISR LASLTSLI