Gene SNSL254_A4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4218 
Symbol 
ID6483860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4109431 
End bp4110600 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID642739471 
Productputative uroporphyrinogen III C-methyltransferase 
Protein accessionYP_002043170 
Protein GI194443118 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.359129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC AAGAAAAATC CTCCGCCGTG GTTGATGAGA CCAGGGAGAG CGTGGAAACC 
ACGCCACAGC CAGTTAATAC CGAGAAAAAA AGTAAGAACG GCGCCGCGCT GGTATTAAGC
GCGGTGGCGA TTGCGATTGC CCTGGCGGCA GGTATTGGGC TTTATGGCTG GGGGAAACAG
CAAGCAACCG CGCAAACGGA AACCAGCGAT GCGCTGGCGA CGCAACTGAC CGCCTTGCAA
AAGGCGCAGG AGAGCCAAAA AGCGGAGCTG GAAGGGATTA TCAAAAAACA AGCGGCGCAG
TTAGAAGACG CGAATCGCCA ACAGGCGGCG CTGGCGAAAC AGCTTGATGA AGTACAACAA
AAAGTCGCCA CTATTTCCGG CAGCGATGCT AAAACCTGGC TGCTGGCGCA GGCTGATTTC
CTGGTGAAAC TCGCCGGACG CAAGCTATGG AGCGATCAGG ACGTCACTAC CGCCGCTGCG
CTGCTCAAAA GCGCTGACGC CAGTCTGGCG GACATGAATG ACCCCAGCCT GATTACCGCA
CGACGCGCGA TTACTGACGA TATCGCCAGC CTGTCATCCG TTGCGCAGAT CGACTACGAC
GGCATTATTC TCAAGCTCAA TCAGCTCTCT AACCAAATCG ATAACCTGCG TCTGGCGGAT
AACGATACCG ATGGTTCGCC GATGGATTCA GACAGCAGCG AGCTGTCCAG CTCGCTAAGC
GAATGGCGCG TTAACCTGCA AAAAAGCTGG CAGAACTTTA TGGACAGCTT TATTACCATT
CGCCGCCGCG ATGATACCGC CGTACCGCTG TTGGCGCCCA ACCAGGACGT CTATTTACGC
GAAAATATTC GCTCCCGCCT GTTAGTCGCC GCGCAGGCCG TGCCACGCCA TCAGGAAGAA
ACATACCGTC AGGCGCTGGA TAACGTTTCG ACCTGGGTTC GCGCTTATTA CGATACTGAC
GACGCCGCGA CAAAAGCCTT CCTGGAGGAG GTCGATAAAT TAAGCCAGCA AAATATCACG
ATGGATCTGC CGGAAACCCT GGGAAGCCAG GCGATTCTTG AAAAACTGAT GCAAACCCGC
GTGCGTAATC TGCTGGCGCA ACCGACAGTC TCTACGGCAG CGCCTGCCAC GCAGACAGAC
GCTCCGGCAG CCGCGCCGCA AGGAGAATAA
 
Protein sequence
MTEQEKSSAV VDETRESVET TPQPVNTEKK SKNGAALVLS AVAIAIALAA GIGLYGWGKQ 
QATAQTETSD ALATQLTALQ KAQESQKAEL EGIIKKQAAQ LEDANRQQAA LAKQLDEVQQ
KVATISGSDA KTWLLAQADF LVKLAGRKLW SDQDVTTAAA LLKSADASLA DMNDPSLITA
RRAITDDIAS LSSVAQIDYD GIILKLNQLS NQIDNLRLAD NDTDGSPMDS DSSELSSSLS
EWRVNLQKSW QNFMDSFITI RRRDDTAVPL LAPNQDVYLR ENIRSRLLVA AQAVPRHQEE
TYRQALDNVS TWVRAYYDTD DAATKAFLEE VDKLSQQNIT MDLPETLGSQ AILEKLMQTR
VRNLLAQPTV STAAPATQTD APAAAPQGE