Gene SNSL254_A4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4204 
SymbolwecD 
ID6483718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4099291 
End bp4099968 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID642739458 
ProductTDP-fucosamine acetyltransferase 
Protein accessionYP_002043161 
Protein GI194445554 
COG category 
COG ID 
TIGRFAM ID[TIGR02382] TDP-D-fucosamine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCC GCGCCAGTAT TGAACCGTTA CTCTGGGAAA ATACGTTCTT TGGCGTGAAT 
AGCGGCATTG TGCGTATCGA TGCCTCAGCG CCCGAATTAA CGCCAGAAGC GCTGCAGGCG 
TGGCAACGCG TGCAGGTAAA AGTGCCGGCT GAAAACATCG CCTGGCTGTC GGCGTTGCAA 
TCGCTGGGAT TCTCTTTGGT TGAAGGCGAG GTGGATTTTG CGTTGCCGGT AAAAGGGCAT 
CGCGACCAGC ATGGCGCGGA AATTGCAAAC CTTAAAGACA TTCCTGCTTT GCGTCAGTTG 
GCCGGAGAGG CGTTTACGCA GAGTCGTTTT CGCGCGCCGT GGTATGCGCC CGACGCCAGC 
GTCCGTTTTT ACGCCCAGTG GATTGAGAAT GCGGTACGCG GCACGTTTGA TCACCAATGC 
CTGGTGCTTC GCACGGAGAC AGGCGCTATC CGCGGTTACG TCTCGCTGCG GGAATTGAAT 
GATACCGACG CGCGCATTGG CCTGTTGGCC GGACGCGGCG CGGGAGCGGA ACTTATGCAG 
GCGGCGATCT GTTGGGCGCA GAGTCGCGGC AAAGCAACAT TGCGGGTGGC GACCCAGTTG 
GGCAACACCG CCGCGCTTAA ACGTTACATA CAAAGCGGTG CCAACATCGA AAGCACTGCG 
TACTGGTTAT ACAGGTGA
 
Protein sequence
MPVRASIEPL LWENTFFGVN SGIVRIDASA PELTPEALQA WQRVQVKVPA ENIAWLSALQ 
SLGFSLVEGE VDFALPVKGH RDQHGAEIAN LKDIPALRQL AGEAFTQSRF RAPWYAPDAS 
VRFYAQWIEN AVRGTFDHQC LVLRTETGAI RGYVSLRELN DTDARIGLLA GRGAGAELMQ 
AAICWAQSRG KATLRVATQL GNTAALKRYI QSGANIESTA YWLYR