Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4202 |
Symbol | rfbB2 |
ID | 6483175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4097989 |
End bp | 4099056 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739456 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_002043159 |
Protein GI | 194442418 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA TTCTGGTGAC CGGCGGCGCA GGCTTTATCG GATCTGCGGT GGTACGGCAT ATCATCCATG AAACGGCAGA CGCGGTGGTG GTGGTGGATA AACTCACCTA TGCGGGCAAC CTGATGTCTC TGGCATCGGT GACGCAAAGC GACCGTTTCG CCTTTGAGAA GGTGGATATC TGCGATCGGG CATCACTGGA GCGAGTCTTC CAGCAGTATC ATCCCAATAG CGTGATGCAC CTGGCGGCGG AAAGCCATGT AGACCGTTCC ATCGACGGCC CGGCGGCGTT TATTGAAACG AATATAGTTG GTACTTACAC CTTGCTGGAA GCCGCTCGCG CTTACTGGTC CGCGCTTGAC GCGGACGCTA AAGCGGCGTT CCGCTTCCAC CATATCTCCA CCGATGAAGT GTATGGCGAT CTGCATACTG CAGACGATTT CTTCACCGAA ACCACGCCAT ATGCGCCAAG CAGCCCTTAT TCCGCCTCCA AAGCCAGCAG CGACCATCTG GTACGCGCCT GGTTACGTAC CTACGGTCTG CCTACGCTTG TCACCAACTG CTCTAATAAC TACGGGCCCT ACCATTTCCC GGAAAAACTG ATCCCGCTGA TGATTCTGAA CGCGCTGGCG GGTAAACCAT TGCCGGTCTA TGGCAACGGT CAGCAAATTC GCGACTGGCT GTATGTAGAG GATCATGCCC GTGCGTTGTA TCACGTGGTG ACGAACGGTG CGGTGGGCGA AACGTATAAT ATCGGCGGTC ATAACGAACG TAAAAATCTG GATGTGGTCA GGACGATCTG CGCTCTGTTG GAGGAACTGG CCCCGCAAAA ACCGCAGGGT GTGGCGAATT ATCACGATCT GATTACCTTC GTCGACGATC GCCCCGGCCA TGACTTACGC TATGCCATCG ACGCGTCGAA AATCGCCCGC GAGCTGGGCT GGACGCCGCA GGAAACCTTC GAAAGCGGGA TGCGAAAAAC CGTTCAGTGG TATCTCGCCA ATGAGGCCTG GTGGAAACCC GTGCAGGATG GCAGTTATCA GGGCGAACGC TTAGGGCTGA AACGCTAA
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Protein sequence | MKRILVTGGA GFIGSAVVRH IIHETADAVV VVDKLTYAGN LMSLASVTQS DRFAFEKVDI CDRASLERVF QQYHPNSVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWSALD ADAKAAFRFH HISTDEVYGD LHTADDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL PTLVTNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYHVV TNGAVGETYN IGGHNERKNL DVVRTICALL EELAPQKPQG VANYHDLITF VDDRPGHDLR YAIDASKIAR ELGWTPQETF ESGMRKTVQW YLANEAWWKP VQDGSYQGER LGLKR
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