Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4195 |
Symbol | rhlB |
ID | 6484296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4089737 |
End bp | 4091002 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739449 |
Product | ATP-dependent RNA helicase RhlB |
Protein accession | YP_002043152 |
Protein GI | 194445390 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 96 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA CACATTTAAC AGAACAGAAG TTTTCCGACT TCGCCCTGCA CCCACAGGTG GTTGAAGCCC TTGAAAAAAA AGGGTTTTAT AATTGTACGC CCATTCAGGC ACTGGCCCTT CCGCTAACGC TGGCGGGTCG TGACGTTGCA GGGCAGGCGC AAACCGGTAC CGGGAAAACG ATGGCGTTTC TGACGTCAAC GTTTCATTAT TTACTTTCTC ATCCCGCGAT CGACGATCGC AAGGTGAACC AGCCGCGCGC GCTGATCATG GCGCCGACGC GTGAATTAGC CGTACAAATT CACGCAGACG CGGAGCCGTT GGCGCAAGCG ACAGGCTTAA AATTAGGCTT GGCTTACGGC GGCGATGGTT ACGACAAGCA GCTTAAAGTG CTGGAAAGCG GCGTTGATAT TCTTATTGGT ACGACGGGCC GACTGATCGA CTACGCCAAA CAAAATCACA TTAACCTCGG CGCCATTCAG GTCGTCGTAC TCGATGAAGC CGATCGCATG TACGATTTGG GCTTTATTAA AGATATCCGC TGGCTGTTCC GTCGTATGCC GCCGGCTGCG CAGCGTCTGA ACATGTTGTT CTCCGCCACC CTGTCTTATC GGGTTCGCGA GCTGGCGTTT GAACAGATGA ACAACGCCGA ATATGTTGAA GTGGAACCGG AGCAAAAGAC CGGCCACCGC ATTAAAGAAG AGCTTTTCTA CCCCTCTAAT GAAGAGAAAA TGCGTTTACT GCAAACGCTG ATCGAAGAAG AGTGGCCGGA TCGCGCCATT ATTTTCGCCA ACACCAAGCA TCGTTGCGAA GATATCTGGG GACATCTGGC GGCAGATGGC CATCGTGTTG GTCTGCTGAC CGGCGACGTC GCGCAGAAAA AGCGCCTGCG GATTCTGGAT GAGTTCACCC GCGGCGATCT GGATATTCTT GTGGCGACCG ATGTCGCGGC GCGCGGGTTG CATATCCCCG CCGTAACGCA CGTCTTTAAC TACGATCTGC CAGACGATTG TGAAGACTAT GTTCACCGTA TCGGTCGTAC CGGTCGCGCT GGCGCCAGCG GGCATTCCAT CAGCCTGGCT TGCGAAGAGT ATGCGCTGAA TCTGCCCGCC ATTGAGAGCT ATATCGGCCA CTCGATTCCG GTCAGCAAAT ACAATCCGGA AGCGCTCATG AACGATCTAC CCAAGCCGTT GCGCCTGACG CGTTCGCGTC CTGGCAATGG TCCGCGTCGT GCTGGCGCTC CGCGTAATCG TCGTCGTTCA GGTTAA
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Protein sequence | MSKTHLTEQK FSDFALHPQV VEALEKKGFY NCTPIQALAL PLTLAGRDVA GQAQTGTGKT MAFLTSTFHY LLSHPAIDDR KVNQPRALIM APTRELAVQI HADAEPLAQA TGLKLGLAYG GDGYDKQLKV LESGVDILIG TTGRLIDYAK QNHINLGAIQ VVVLDEADRM YDLGFIKDIR WLFRRMPPAA QRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPEQKTGHR IKEELFYPSN EEKMRLLQTL IEEEWPDRAI IFANTKHRCE DIWGHLAADG HRVGLLTGDV AQKKRLRILD EFTRGDLDIL VATDVAARGL HIPAVTHVFN YDLPDDCEDY VHRIGRTGRA GASGHSISLA CEEYALNLPA IESYIGHSIP VSKYNPEALM NDLPKPLRLT RSRPGNGPRR AGAPRNRRRS G
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