Gene SNSL254_A4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4185 
SymbolilvE 
ID6486295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4077191 
End bp4078120 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID642739439 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002043142 
Protein GI194443358 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA AAAAAGCTGA TTATATTTGG TTCAATGGCG AGATGGTGCG CTGGGAAGAC 
GCGAAGGTTC ACGTAATGTC CCACGCGCTG CACTACGGTA CGTCGGTATT TGAAGGGATT 
CGGTGCTACG ACTCTCACAA AGGCCCGGTA GTGTTTCGTC ATCGTGAACA TATGCAGCGT 
CTGCGCGACT CAGCAAAAAT TTATCGTTTT CCGGTTTCCC AGAGTATTGA TGAGCTGATG 
GAAGCCTGCC GCGAAGTGAT CCGCAAAAAC AACCTGACCA GCGCCTATAT CCGTCCGTTG 
GTATTTGTCG GCGATGTCGG TATGGGCGTT AACCCGCCCC CGGGATACAC CACTGACGTC 
ATCATCGCCG CGTTCCCGTG GGGGGCATAC CTGGGCGCCG AAGCGCTGGA TCAGGGGATC 
GATGCGATGG TTTCTTCCTG GAATCGCGCT GCGCCGAACA CCATTCCAAC CGCTGCGAAA 
GCGGGCGGTA ACTACCTCTC CTCACTGCTG GTGGGTAGCG AAGCGCGCCG CCACGGCTAT 
CAGGAAGGCA TCGCCCTGGA TGTAAACGGC TATATCTCCG AAGGCGCAGG TGAAAACCTG 
TTTGAGGTAA AAGATGGCGT GCTGTTTACT CCGCCGTTTA CCTCTTCCGC GCTGCCAGGC 
ATTACTCGCG ACGCGATCAT CAAACTGGCG AAAGAGCTGG GTATTGAAGT GCGCGAGCAG 
GTGCTGTCCC GTGAGTCGCT GTATCTGGCC GACGAAGTGT TTATGTCCGG AACCGCGGCA 
GAAATTACTC CGGTACGCAG CGTTGATGGT ATCCAGGTAG GTGAAGGCCG TTGCGGCCCT 
GTTACCAAGC GTATTCAACA AGCCTTCTTT GGTCTCTTCA CTGGAGAAAC CGAGGATAAA 
TGGGGCTGGT TGGATCCGGT AAATTCATAA
 
Protein sequence
MTTKKADYIW FNGEMVRWED AKVHVMSHAL HYGTSVFEGI RCYDSHKGPV VFRHREHMQR 
LRDSAKIYRF PVSQSIDELM EACREVIRKN NLTSAYIRPL VFVGDVGMGV NPPPGYTTDV 
IIAAFPWGAY LGAEALDQGI DAMVSSWNRA APNTIPTAAK AGGNYLSSLL VGSEARRHGY 
QEGIALDVNG YISEGAGENL FEVKDGVLFT PPFTSSALPG ITRDAIIKLA KELGIEVREQ 
VLSRESLYLA DEVFMSGTAA EITPVRSVDG IQVGEGRCGP VTKRIQQAFF GLFTGETEDK 
WGWLDPVNS