| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4164 |
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| Symbol | rbsD |
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| ID | 6486227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4057944 |
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| End bp | 4058363 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642739420 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_002043129 |
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| Protein GI | 194442938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.564456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG GCACCGTACT CAACTCTGAA ATCTCGTCGG TCATTTCCCG TCTGGGGCAT
ACTGATACTC TGGTGGTCTG TGATGCGGGT TTACCCATCC CGAATAGCAC TGCGCGTATC
GATATGGCAC TAACCCAGGG CGTACCTTCT TTTATGCAGG TGGTGGATGT CGTGACCCGG
GAAATGCAGG TTGAGGCGGC GATTCTTGCA ACGGAAATCA AACAACAGAA TCCGCAGCTC
CACGAAACGT TGCTCACTCA CCTTGAGCAA CTGCAGCAAC ACCAGGGAAA CACCATAAAA
ATTAGTTATA CGACACACGA ACAATTCAAA AAATTGACTG CAGACAGTCA GGCGGTGATT
CGCAGCGGGG AGTGTTCCCC GTATGCGAAC GTCATTCTTT GCGCTGGCGT CACGTTCTGA
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| Protein sequence | MKKGTVLNSE ISSVISRLGH TDTLVVCDAG LPIPNSTARI DMALTQGVPS FMQVVDVVTR
EMQVEAAILA TEIKQQNPQL HETLLTHLEQ LQQHQGNTIK ISYTTHEQFK KLTADSQAVI
RSGECSPYAN VILCAGVTF
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