| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4149 |
|---|
| Symbol | atpH |
|---|
| ID | 6482944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4044253 |
|---|
| End bp | 4044786 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642739405 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_002043114 |
|---|
| Protein GI | 194445487 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0979605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAT TTGTTACGGT AGCTCGCCCC TACGCCAAAG CAGCTTTTGA CTTTGCCGTT
GAACACCAAA GTGTAGAGCG CTGGCAGGAT ATGCTGGCGT TTGCCGCCGA GGTAACCAAG
AACGAACAAA TGGCAGAGCT TCTCTCTGGC GCGCTGGCGC CGGAAACGCT CGCTGAGTCG
TTTATCGCAG TCTGCGGTGA GCAGTTAGAC GAAAACGGTC AGAACCTGAT TCGGGTGATG
GCTGAAAATA ATCGTCTGAA CGCGCTCCCG GATGTTCTGG AGCAGTTTAT TCATCTGCGT
GCCGCCAGTG AAGCTACCTC CGAGGTAGAA GTTACGTCGG CAACCGCATT GAGTGAAGAG
CAGCTTTCGA AAATCAGCGC CGCGATGGAA AAACGTCTGT CACGCAAAGT GAAGCTGAAT
TGCAAAATCG ATAAGTCTGT AATGGCAGGC GTTATCATCC GGGCGGGTGA TATGGTCATT
GATGGCAGCG TACGCGGCCG TCTTGAGCGC CTTGCAGACG TCTTGCAGTC TTAA
|
|---|
| Protein sequence | MSEFVTVARP YAKAAFDFAV EHQSVERWQD MLAFAAEVTK NEQMAELLSG ALAPETLAES
FIAVCGEQLD ENGQNLIRVM AENNRLNALP DVLEQFIHLR AASEATSEVE VTSATALSEE
QLSKISAAME KRLSRKVKLN CKIDKSVMAG VIIRAGDMVI DGSVRGRLER LADVLQS
|
|---|
| |