| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4146 |
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| Symbol | atpD |
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| ID | 6484188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4040376 |
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| End bp | 4041758 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739402 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_002043111 |
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| Protein GI | 194444846 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTG GAAAGATTGT CCAGGTAATC GGCGCCGTGG TCGACGTCGA GTTCCCTCAG
GATGCCGTAC CACGCGTGTA CGATGCCCTT GAGGTGCAGA ATGGTAATGA GAAGCTGGTG
CTGGAAGTTC AGCAGCAGCT TGGCGGCGGT ATTGTGCGTA CCATCGCGAT GGGGTCTTCT
GACGGTCTGC GTCGCGGTCT GGATGTAAAA GATCTCGAAC ACCCGATCGA AGTCCCGGTA
GGTAAAGCTA CGCTGGGTCG TATCATGAAC GTCCTGGGCG AACCGGTCGA CATGAAAGGC
GAGATCGGCG AAGAAGAGCG TTGGGCGATT CACCGCGCAG CGCCTTCCTA CGAAGAGTTG
TCAAACTCTC AGGAACTGCT GGAAACCGGT ATCAAAGTTA TCGACCTGAT GTGCCCGTTC
GCGAAGGGCG GTAAAGTCGG TCTGTTCGGT GGTGCGGGTG TAGGTAAAAC CGTAAACATG
ATGGAGCTTA TTCGTAACAT CGCGATCGAG CACTCCGGTT ACTCTGTGTT TGCGGGCGTA
GGTGAACGTA CTCGTGAGGG TAACGACTTC TACCACGAAA TGACCGACTC CAACGTTATC
GATAAAGTAT CCCTGGTGTA TGGCCAGATG AACGAGCCGC CGGGAAACCG TCTGCGCGTT
GCACTGACCG GCCTGACCAT GGCGGAGAAA TTCCGTGACG AAGGTCGTGA CGTACTGCTG
TTCGTCGATA ACATCTATCG TTACACCCTG GCCGGTACGG AAGTATCCGC ACTGCTGGGC
CGTATGCCTT CCGCGGTAGG TTATCAGCCG ACTCTGGCGG AAGAGATGGG CGTTCTGCAG
GAACGTATCA CCTCCACCAA AACCGGTTCT ATCACCTCCG TACAGGCGGT ATACGTACCG
GCGGATGACT TGACTGACCC GTCTCCAGCC ACCACCTTTG CGCACTTAGA TGCAACCGTG
GTACTGAGCC GTCAGATCGC ATCCTTGGGT ATCTACCCGG CCGTTGACCC GCTGGACTCC
ACCAGCCGTC AGTTGGATCC GCTGGTTGTT GGTCAGGAAC ACTACGACAC CGCGCGTGGC
GTTCAGTCCA TCCTGCAGCG TTATCAGGAA CTGAAAGACA TCATCGCCAT CCTCGGTATG
GATGAACTGT CTGAAGAAGA TAAACTGGTG GTAGCACGCG CGCGTAAAAT TCAGCGTTTC
CTGTCCCAGC CGTTCTTCGT GGCGGAAGTA TTTACCGGTT CTCCGGGCAA ATACGTTTCC
CTGAAAGACA CCATCCGTGG CTTTAAAGGC ATCATGGAAG GCGAATACGA TCACCTGCCG
GAGCAGGCGT TCTACATGGT CGGTTCCATC GACGAAGCCG TGGAAAAAGC CAAAAAACTT
TAA
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| Protein sequence | MATGKIVQVI GAVVDVEFPQ DAVPRVYDAL EVQNGNEKLV LEVQQQLGGG IVRTIAMGSS
DGLRRGLDVK DLEHPIEVPV GKATLGRIMN VLGEPVDMKG EIGEEERWAI HRAAPSYEEL
SNSQELLETG IKVIDLMCPF AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV
GERTREGNDF YHEMTDSNVI DKVSLVYGQM NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL
FVDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ ERITSTKTGS ITSVQAVYVP
ADDLTDPSPA TTFAHLDATV VLSRQIASLG IYPAVDPLDS TSRQLDPLVV GQEHYDTARG
VQSILQRYQE LKDIIAILGM DELSEEDKLV VARARKIQRF LSQPFFVAEV FTGSPGKYVS
LKDTIRGFKG IMEGEYDHLP EQAFYMVGSI DEAVEKAKKL
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