Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4142 |
Symbol | glmS |
ID | 6486123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4035300 |
End bp | 4037129 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739398 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_002043107 |
Protein GI | 194445549 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTGGAA TTGTTGGCGC TATCGCGCAG CGTGATGTAG CTGAAATCCT TCTCGAAGGT TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTGGT GGATGCAGAA GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCTCA GGCAGCGGAA GAACATCCTC TGCATGGCGG CACCGGTATT GCTCACACTC GCTGGGCGAC GCACGGTGAA CCTTCAGAAG CTAACGCGCA TCCGCATGTT TCTGAACACA TTGTGGTGGT GCATAACGGC ATCATCGAAA ACCATGAACC GCTGCGTGAA GCGTTAAAAG CGCGTGGCTA TACCTTCGTT TCTGAAACCG ACACCGAAGT GATTGCACAC CTGGTAAACT GGGAACTGAA ACAGGGCGGT ACTCTGCGTG AGGCTGTTTT GCGTGCTATC CCGCAACTGC GTGGCGCATA TGGTACGGTG ATCATGGATA CCCGCCATCC GGATACGCTG CTGGCTGCCC GTTCAGGTAG CCCGCTGGTG ATTGGCCTGG GTATGGGCGA AAACTTTATC GCTTCTGACC AACTGGCGCT GTTGCCAGTG ACTCGTCGCT TTATCTTCCT TGAAGAGGGC GATATCGCTG AAATCACTCG CCGTTCGGTA AATATCTTCG ATAACACCGG CGCGGAAGTA AAACGTCAGG ATATCGAATC TAATCTGCAA TATGACGCGG GCGATAAAGG TATTTACCGC CACTACATGC AGAAAGAGAT CTACGAACAG CCGAACGCGA TCAAAAACAC CCTTACCGGG CGCATCAGCC ACGGTGAGGT GGATTTAAGC GAGCTGGGAC CGAACGCCGA TGATCTGTTG TCGAAGGTTG AGCATATTCA GATCCTCGCC TGCGGTACGT CTTACAACTC CGGTATGGTT TCCCGTTACT GGTTTGAATC GCTGGCAGGT ATTCCGTGCG ACGTTGAAAT CGCCTCTGAA TTCCGCTATC GCAAATCTGC CGTGCGCCGT AACAGCCTGA TGATCACGCT CTCCCAGTCT GGCGAAACGG CAGATACCCT GGCTGGCCTG CGTCTGTCGA AAGAGCTGGG ATATTTGGGT TCTCTGGCCA TTTGTAACGT GCCGGGCTCT TCGCTGGTGC GTGAATCCGA TCTGGCGCTG ATGACCAACG CGGGTACGGA AATTGGCGTA GCATCTACCA AAGCCTTCAC CACCCAGTTA ACCGTGCTGT TGATGCTGGT GGCGAAACTG GCGCGTCTGA AAGGTCTGGA TGCGTCCATT GAGCATGATA TCGTGCATGG CCTACAGGCG CTGCCGAGCC GTATTGAGCA GATGCTGTCG CAGGACAAAC GTATCGAAGC CCTGGCGGAA GATTTCTCTG ACAAACACCA TGCGCTGTTC CTGGGGCGTG GCGATCAATA TCCGATTGCG CTCGAAGGCG CGCTGAAGCT GAAAGAGATC TCTTACATTC ACGCGGAAGC CTATGCTGCA GGCGAGCTGA AACACGGGCC GTTGGCGCTG ATTGACGCCG ATATGCCGGT GATTGTGGTG GCGCCGAACA ACGAACTGCT GGAGAAACTG AAATCCAACA TCGAAGAAGT TCGCGCGCGT GGCGGTCAGT TGTACGTCTT CGCCGATCAG GATGCGGGTT TTGTGAGCAG CGACAACATG CACATCATTG AGATGCCGCA TGTGGAAGAA GTGATCGCGC CTATCTTCTA CACCGTTCCG CTGCAACTGC TGGCGTATCA CGTGGCGCTG ATTAAAGGCA CCGACGTTGA CCAGCCGCGT AACCTGGCGA AATCAGTGAC GGTAGAGTAA
|
Protein sequence | MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE EHPLHGGTGI AHTRWATHGE PSEANAHPHV SEHIVVVHNG IIENHEPLRE ALKARGYTFV SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDTRHPDTL LAARSGSPLV IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDNTGAEV KRQDIESNLQ YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGEVDLS ELGPNADDLL SKVEHIQILA CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL RLSKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL ARLKGLDASI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR GGQLYVFADQ DAGFVSSDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR NLAKSVTVE
|
| |