| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4134 |
|---|
| Symbol | phoU |
|---|
| ID | 6485967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4026266 |
|---|
| End bp | 4026991 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739390 |
|---|
| Product | transcriptional regulator PhoU |
|---|
| Protein accession | YP_002043099 |
|---|
| Protein GI | 194445602 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.116669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTC TGAACCTTAA TAAACATATT TCCGGCCAGT TCAACGCCGA ACTGGAAAGC
ATCCGCACTC AGGTAATGAC CATGGGCGGC ATGGTGGAGC AGCAGCTTTC TGACGCTATC
ACCGCCATGC ACAACCAGGA CAGCGAGCTG GCGAAGCGCG TGGTAGAAGG CGATCATCAG
GTTAATATGA TGGAAGTCGC CATCGATGAA GCCTGCGTGC GTATTATCGC CAAGCGCCAG
CCGACGGCGA GCGATCTGCG TCTGGTGATG GCGATTATCA AAACCATCGC CGAACTGGAG
CGCATTGGCG ACGTGGCGGA TAAAATCTGC CGTACCGCGC TGGAGAAATT CTCCCAGCAG
CATCAGCCGC TGCTGGTGAG TCTGGAGTCA CTGGGCCGCC ACACCGTGCA GATGCTACAC
GACGTGCTGG ATGCGTTCGC GCGCATGGAT CTCGACGAAG CGGTGCGTAT CTACCGTGAA
GACAAGAAAG TTGACCAGGA GTACGAAGGT ATCGTGCGTC AGCTGATGAC CTACATGATG
GAAGACTCGC GCACCATTCC CAGCGTGCTG ACCGCGTTAT TCTGCGCTCG TTCTATCGAG
CGTATCGGTG ACCGTTGCCA GAATATCTGT GAATACATCT TCTACTTCGT GAAGGGGCAA
GACTTCCGTC ACGTCGGCGG CGATGAGCTG GATAAGCTGC TGGCGGGGAA AGATCCGAAA
GAGTAA
|
|---|
| Protein sequence | MDSLNLNKHI SGQFNAELES IRTQVMTMGG MVEQQLSDAI TAMHNQDSEL AKRVVEGDHQ
VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTIAELE RIGDVADKIC RTALEKFSQQ
HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAVRIYRE DKKVDQEYEG IVRQLMTYMM
EDSRTIPSVL TALFCARSIE RIGDRCQNIC EYIFYFVKGQ DFRHVGGDEL DKLLAGKDPK
E
|
|---|
| |