| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4126 |
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| Symbol | |
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| ID | 6483029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4017008 |
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| End bp | 4018654 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642739382 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_002043091 |
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| Protein GI | 194446373 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.222064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCGC AACGCAATCT TTTAGTCATC GCTTTGCTGT TCGTGTCTTT CATGATCTGG
CAAGCCTGGG AGCAGGATAA AAATCCGCAA CCTCAGACTC AACAGACCAC GCAGACAACG
ACCACCGCAG CGGGTAGCGC CGCCGACCAG GGCGTACCGG CCAGTGGCCA GGGGAAAATG
ATTACGGTGA AAACCGATGT GCTTGATTTG ACTATCAACA CCCGTGGTGG TGATGTCGAG
CAGGCCTTGC TCCCGGCTTA CCCGAAAGAA CTGGGTTCCA ACGAACCGTT CCAGCTGCTG
GAAACCACCC CGCAGTTTAT CTATCAGGCG CAAAGCGGCC TGACAGGCCG CGGCGGCCCG
GATAACCCGG CGAACGGCCC GCGTCCGCTG TACAACGTCG AGAAAGAGGC GTTTGTACTG
GCCGACGGTC AGAACGAACT GCAGGTTCCG ATGACTTATA CTGACGCCGC AGGCAACACG
TTTACCAAAA CGTTTGTCTT TAAGCGTGGC GATTATGCGG TTAACGTGAA CTATAGCGTG
CAGAACGCCG GCGAAAAACC GCTGGAAGTC TCCACCTTTG GTCAGTTAAA ACAATCCGTC
AACCTGCCTC CTCATCGCGA CACCGGCAGC AGCAACTTTG CGCTGCATAC GTTCCGCGGC
GCAGCGTACT CCACGCCGGA TGAGAAGTAT GAGAAATACA AATTCGACAC CATTGCCGAT
AACGAAAACC TCAACGTCAG CTCCAAAGGC GGTTGGGTGG CAATGTTGCA ACAGTATTTC
GCTACCGCAT GGATTCCGCG TAACGACGGC ACCAACAATT TCTACACCGC TAATCTGGGT
AACGGCATTG TCGCTATCGG CTATAAAGCG CAGCCGGTAC TGGTACAGCC AGGCCAGACT
GGCGCGATGA CCAGCACCCT GTGGGTCGGC CCGGAAATTC AGGATAAAAT GGCGGCTGTT
GCACCGCACC TGGATTTGAC CGTGGACTAC GGTTGGTTGT GGTTCATCTC TCAGCCGCTG
TTCAAGTTGC TGAAGTGGAT CCACAGCTTT GTGGGCAACT GGGGCTTCTC CATTATCATC
ATTACCTTTA TCGTTCGCGG TATCATGTAC CCGCTGACCA AAGCGCAGTA CACGTCAATG
GCGAAGATGC GTATGCTGCA GCCGAAAATT CAGGCGATGC GCGAACGTCT TGGCGATGAT
AAACAGCGCC AAAGCCAGGA GATGATGGCC CTGTACAAAG CGGAGAAGGT TAACCCGCTG
GGCGGCTGCT TCCCGCTGAT CATCCAGATG CCTATCTTCC TGGCGTTGTA CTACATGCTG
ATGGGTTCCA TTGAACTGCG TCATGCGCCG TTCGCGCTGT GGATTCATGA CCTGTCCGCA
CAGGACCCGT ACTACATTCT GCCGATCCTG ATGGGCGTAA CGATGTTCTT CATTCAGAAG
ATGTCGCCGA CCACCGTGAC CGACCCGATG CAGCAGAAGA TCATGACCTT TATGCCGGTC
ATCTTTACGG TGTTCTTCCT GTGGTTCCCG TCAGGTCTGG TGCTGTACTA TATCGTCAGC
AACCTGGTCA CCATCATTCA GCAGCAGCTG ATTTACCGTG GTCTGGAGAA GCGTGGCCTG
CATAGCCGCG AGAAGAAAAA ATCCTGA
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| Protein sequence | MDSQRNLLVI ALLFVSFMIW QAWEQDKNPQ PQTQQTTQTT TTAAGSAADQ GVPASGQGKM
ITVKTDVLDL TINTRGGDVE QALLPAYPKE LGSNEPFQLL ETTPQFIYQA QSGLTGRGGP
DNPANGPRPL YNVEKEAFVL ADGQNELQVP MTYTDAAGNT FTKTFVFKRG DYAVNVNYSV
QNAGEKPLEV STFGQLKQSV NLPPHRDTGS SNFALHTFRG AAYSTPDEKY EKYKFDTIAD
NENLNVSSKG GWVAMLQQYF ATAWIPRNDG TNNFYTANLG NGIVAIGYKA QPVLVQPGQT
GAMTSTLWVG PEIQDKMAAV APHLDLTVDY GWLWFISQPL FKLLKWIHSF VGNWGFSIII
ITFIVRGIMY PLTKAQYTSM AKMRMLQPKI QAMRERLGDD KQRQSQEMMA LYKAEKVNPL
GGCFPLIIQM PIFLALYYML MGSIELRHAP FALWIHDLSA QDPYYILPIL MGVTMFFIQK
MSPTTVTDPM QQKIMTFMPV IFTVFFLWFP SGLVLYYIVS NLVTIIQQQL IYRGLEKRGL
HSREKKKS
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