Gene SNSL254_A4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4121 
SymbolrecF 
ID6482980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4011881 
End bp4012954 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content55% 
IMG OID642739377 
Productrecombination protein F 
Protein accessionYP_002043086 
Protein GI194445873 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.976477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA CGCGCCTTTT AATCAAAGAC TTCCGCAACA TAGAAAATGC GGATCTCGCT 
TTATCCCCCG GCTTTAACTT CCTGGTTGGC GCCAACGGCA GCGGCAAAAC CAGCGTGCTG
GAAGCTATCT ATACGCTTGG CCATGGTCGG GCGTTTCGCA GTTTGCAGCC TGGCCGCGTG
ATTCGTCATG AGCAGGAAGC GTTTGTTCTT CACGGGCGAT TACAGAGCGA AGAGCGTGAG
ACGTCGATTG GCTTAACCAA AGATAAGCAG GGCGACAGCA AGGTCCGTAT CGACGGTACC
GACGGTCACA AGATCGCGGA GCTGGCGCAT TTAATGCCGA TGCAGTTGAT TACGCCGGAG
GGGTTTACTT TACTCAACGG CGGCCCCAAA TACAGAAGAG CGTTCCTTGA CTGGGGATGC
TTTCACAACG AAGCCGGATT CTTCACCGCC TGGAGCAACC TGAAACGATT GCTGAAACAG
CGTAATGCCG CGCTGCGCCA GGTGAGTCGT TATGAGCAAT TGCGCCCGTG GGATAAAGAG
CTGATTCCGC TGGCGGAACA AATTAGTACC TGGCGGGCGG AGTACAGTAG CGCTATCGCA
CAGGACATGG CGGATACCTG TCAGCAGTTT TTACCTGAAT TTTCCCTGAC GTTCTCTTTC
CAGCGCGGCT GGGAGAAAGA GACAGACTAT GCGGACGTGC TGGAGCGAAG CTTTGAGCGT
GACCGTATGT TGACCTACAC CGCGCACGGG CCGCATAAAG CGGACTTTCG CATTCGCGCC
GACGGCGCGC CGGTGGAAGA TACCCTGTCG CGCGGGCAGC TAAAGTTATT GATGTGCGCC
TTACGTCTGG CGCAGGGCGA GTTCCTCACC CGCGAAAGCG GGCGGCGCTG CCTGTACCTG
ATAGATGATT TTGCCTCTGA ACTTGACGAT GCGCGTCGCG GACTGCTGGC CAGCCGCTTA
AAAGCCACGC AATCGCAGGT CTTTGTCAGC GCAATTAGCG CTGAACACGT TATAGACATG
TCGGATGAAA ATTCGAAGAT GTTTACCGTG GAAAAGGGTA AAATAACGGA TTAA
 
Protein sequence
MSLTRLLIKD FRNIENADLA LSPGFNFLVG ANGSGKTSVL EAIYTLGHGR AFRSLQPGRV 
IRHEQEAFVL HGRLQSEERE TSIGLTKDKQ GDSKVRIDGT DGHKIAELAH LMPMQLITPE
GFTLLNGGPK YRRAFLDWGC FHNEAGFFTA WSNLKRLLKQ RNAALRQVSR YEQLRPWDKE
LIPLAEQIST WRAEYSSAIA QDMADTCQQF LPEFSLTFSF QRGWEKETDY ADVLERSFER
DRMLTYTAHG PHKADFRIRA DGAPVEDTLS RGQLKLLMCA LRLAQGEFLT RESGRRCLYL
IDDFASELDD ARRGLLASRL KATQSQVFVS AISAEHVIDM SDENSKMFTV EKGKITD