Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4121 |
Symbol | recF |
ID | 6482980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4011881 |
End bp | 4012954 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739377 |
Product | recombination protein F |
Protein accession | YP_002043086 |
Protein GI | 194445873 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.976477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGA CGCGCCTTTT AATCAAAGAC TTCCGCAACA TAGAAAATGC GGATCTCGCT TTATCCCCCG GCTTTAACTT CCTGGTTGGC GCCAACGGCA GCGGCAAAAC CAGCGTGCTG GAAGCTATCT ATACGCTTGG CCATGGTCGG GCGTTTCGCA GTTTGCAGCC TGGCCGCGTG ATTCGTCATG AGCAGGAAGC GTTTGTTCTT CACGGGCGAT TACAGAGCGA AGAGCGTGAG ACGTCGATTG GCTTAACCAA AGATAAGCAG GGCGACAGCA AGGTCCGTAT CGACGGTACC GACGGTCACA AGATCGCGGA GCTGGCGCAT TTAATGCCGA TGCAGTTGAT TACGCCGGAG GGGTTTACTT TACTCAACGG CGGCCCCAAA TACAGAAGAG CGTTCCTTGA CTGGGGATGC TTTCACAACG AAGCCGGATT CTTCACCGCC TGGAGCAACC TGAAACGATT GCTGAAACAG CGTAATGCCG CGCTGCGCCA GGTGAGTCGT TATGAGCAAT TGCGCCCGTG GGATAAAGAG CTGATTCCGC TGGCGGAACA AATTAGTACC TGGCGGGCGG AGTACAGTAG CGCTATCGCA CAGGACATGG CGGATACCTG TCAGCAGTTT TTACCTGAAT TTTCCCTGAC GTTCTCTTTC CAGCGCGGCT GGGAGAAAGA GACAGACTAT GCGGACGTGC TGGAGCGAAG CTTTGAGCGT GACCGTATGT TGACCTACAC CGCGCACGGG CCGCATAAAG CGGACTTTCG CATTCGCGCC GACGGCGCGC CGGTGGAAGA TACCCTGTCG CGCGGGCAGC TAAAGTTATT GATGTGCGCC TTACGTCTGG CGCAGGGCGA GTTCCTCACC CGCGAAAGCG GGCGGCGCTG CCTGTACCTG ATAGATGATT TTGCCTCTGA ACTTGACGAT GCGCGTCGCG GACTGCTGGC CAGCCGCTTA AAAGCCACGC AATCGCAGGT CTTTGTCAGC GCAATTAGCG CTGAACACGT TATAGACATG TCGGATGAAA ATTCGAAGAT GTTTACCGTG GAAAAGGGTA AAATAACGGA TTAA
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Protein sequence | MSLTRLLIKD FRNIENADLA LSPGFNFLVG ANGSGKTSVL EAIYTLGHGR AFRSLQPGRV IRHEQEAFVL HGRLQSEERE TSIGLTKDKQ GDSKVRIDGT DGHKIAELAH LMPMQLITPE GFTLLNGGPK YRRAFLDWGC FHNEAGFFTA WSNLKRLLKQ RNAALRQVSR YEQLRPWDKE LIPLAEQIST WRAEYSSAIA QDMADTCQQF LPEFSLTFSF QRGWEKETDY ADVLERSFER DRMLTYTAHG PHKADFRIRA DGAPVEDTLS RGQLKLLMCA LRLAQGEFLT RESGRRCLYL IDDFASELDD ARRGLLASRL KATQSQVFVS AISAEHVIDM SDENSKMFTV EKGKITD
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