Gene SNSL254_A4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4099 
Symbol 
ID6486318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3986902 
End bp3987114 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content69% 
IMG OID642739355 
Producthypothetical protein 
Protein accessionYP_002043064 
Protein GI194444660 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3114] Heme exporter protein D 
TIGRFAM ID[TIGR03141] heme exporter protein CcmD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCGG CATTTTCATC GTGGAGCGAT TTTTTCGCCA TGGGCGGGTA CGCCTTTTTT 
GTCTGGCTGG CGGTGGCGAT GACCGTGGCG CCGCTGGCGC TGCTGGCGCT GCACACGGTG
CTGCAGCGCC GGGCCATTCT GCGCGGCGTG GCGCAGCAGC GGGCGCGCGA GGCGCGGATG
CGTGCCGCAC AGGCGCAACA GGAGGCCGCG TGA
 
Protein sequence
MSPAFSSWSD FFAMGGYAFF VWLAVAMTVA PLALLALHTV LQRRAILRGV AQQRAREARM 
RAAQAQQEAA