Gene SNSL254_A4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4078 
Symbol 
ID6482452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3969210 
End bp3970070 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID642739335 
Productintegral membrane protein 
Protein accessionYP_002043044 
Protein GI194445333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCT CAACGACGCC TGACGCTATG ACCCTTTCCG TTTTCTGCAT TTTGCTGTTC 
GCCGCGCTGC TACATGCCAG CTGGAACGCC ATTGTCAAAG CGGGAAACGA TAAGCTCTAC 
GCCGCGATCG GCGTCAGCGG TTCCGCGGCG GTCATGGCAT TGATCCTTTT GCCCTTCTCG 
CCGCAGCCAG CTCACGCCAG TATCCCTTTT TTAGCGGCCT CTACCGCGCT CCAGGTGGTG 
TATACCGTCC TGGTGGCGAA AACCTATCAG GTCTCGGACA TGAGCCAGAC CTATCCTCTT 
ATGCGCGGCA CCGCGCCGCT GCTGGTGGCG CTCATTAGCG TTCTGTTTCT TGGCGACAGC 
CTGTCGTCGA TGGCCTGGGT CGGCATCGCA GTGATCTGCA TGGCGATACT TGGGATGGCC 
TGTAATGGCC GCGCCAGTTC TCAACGTGGT GTCGTGCTGG CATTAACTAA CGCCTGTTTT 
ATTGCCGGAT ATACGCTGGT GGACGGGACC GGCGTAAGAC TCTCAGAAAC GGCGCTGGGC 
TATACGCTAT GGTCATTTTT TCTCAACGGC GCCTGCCTGT TAACCTGGGC GATGATTGCG 
CGGCGGCGGG AAGCGTCGCG TTATCTGGCG CAACAGTGGA AAAAAGGCAT TTTTGGCGGG 
ATTGGCACTA TGGGATCTTA TGGGCTGGCG CTATGGGCCA TGACCCAGGC GCCGCTGGCG 
GTGGTCGCCG CGCTGCGTGA GACGTCGATT TTATTCGGCG CGCTGATAGC CTGGCTGTTG 
CTTAAAGAGA AAGTGGCCGG GCTACGTCTG GTGGCGGCAG GCGGGATTGC CCTCGGGGCG 
ATTTTACTCC GTCTGTCATG A
 
Protein sequence
MTPSTTPDAM TLSVFCILLF AALLHASWNA IVKAGNDKLY AAIGVSGSAA VMALILLPFS 
PQPAHASIPF LAASTALQVV YTVLVAKTYQ VSDMSQTYPL MRGTAPLLVA LISVLFLGDS 
LSSMAWVGIA VICMAILGMA CNGRASSQRG VVLALTNACF IAGYTLVDGT GVRLSETALG 
YTLWSFFLNG ACLLTWAMIA RRREASRYLA QQWKKGIFGG IGTMGSYGLA LWAMTQAPLA 
VVAALRETSI LFGALIAWLL LKEKVAGLRL VAAGGIALGA ILLRLS