Gene SNSL254_A4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4066 
Symbol 
ID6484986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3955023 
End bp3955766 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID642739323 
Productputative GntR family transcriptional regulator 
Protein accessionYP_002043032 
Protein GI194443592 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.980684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT TGAGTAAAAG TTCACACATC CCACTGTATC AACAAGTTGT GGAGTGGATA 
AGGGAAAGTA TTTATAGCGG AGAATTAGTT GAGGATGACC GGATACCTTC AGAGTTTCAA
ATCATGGATA TGCTGGAGGT GAGTCGCGGT ACCGTTAAAA AAGCGGTTGA CCAACTTGTC
CGGGAAGGTG TTCTTGTGCA AGTGCAGGGT AAAGGAACTT TCGTAAAGAA GGAAAATGTT
GCTTACCCAC TGGGTGAAGG TTTGCTCTCC TTTGCTGAAG CCTTAGCCAG CCAGAAGATA
AACTTCACAA CCAGTGTTAT AACCTCCCGA CTGGAGCCCG CTAACCGCTT TGTAGCAGAG
AAACTGAGTA TCAAACCGGG ACAAGATGTT TTATTTCTTA AACGCCTTCG TTGTATTGGC
GATGAAAAAG TCATGTTGAT TGAAAATCGT ATCAACATTG ATCTCTGCCC CGGTATTATT
GATGTAGATT TTACCAGGGA AAATTTATTT TCAGCAATAG AAAGATTATC TGATAAGAAA
ATAAGTTTTT CTGAAAGCCG TTACGCAGCT AAATTAATTG GTAATGAGCG AGGCCATTAT
CTTGATATTG GTGAAGACGC ACCTGTTTTG CATTTGGAAC AGTTGGTATT TTTCTCTAGA
GGATTGGCCA TTGATTTTGG TAACGTCTGG TTAAAAGGTA ATAAATATTA TCTTGGCACT
ATTTTACAGC GCCTGGATGC CTGA
 
Protein sequence
MKTLSKSSHI PLYQQVVEWI RESIYSGELV EDDRIPSEFQ IMDMLEVSRG TVKKAVDQLV 
REGVLVQVQG KGTFVKKENV AYPLGEGLLS FAEALASQKI NFTTSVITSR LEPANRFVAE
KLSIKPGQDV LFLKRLRCIG DEKVMLIENR INIDLCPGII DVDFTRENLF SAIERLSDKK
ISFSESRYAA KLIGNERGHY LDIGEDAPVL HLEQLVFFSR GLAIDFGNVW LKGNKYYLGT
ILQRLDA