Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4066 |
Symbol | |
ID | 6484986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3955023 |
End bp | 3955766 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642739323 |
Product | putative GntR family transcriptional regulator |
Protein accession | YP_002043032 |
Protein GI | 194443592 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.980684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT TGAGTAAAAG TTCACACATC CCACTGTATC AACAAGTTGT GGAGTGGATA AGGGAAAGTA TTTATAGCGG AGAATTAGTT GAGGATGACC GGATACCTTC AGAGTTTCAA ATCATGGATA TGCTGGAGGT GAGTCGCGGT ACCGTTAAAA AAGCGGTTGA CCAACTTGTC CGGGAAGGTG TTCTTGTGCA AGTGCAGGGT AAAGGAACTT TCGTAAAGAA GGAAAATGTT GCTTACCCAC TGGGTGAAGG TTTGCTCTCC TTTGCTGAAG CCTTAGCCAG CCAGAAGATA AACTTCACAA CCAGTGTTAT AACCTCCCGA CTGGAGCCCG CTAACCGCTT TGTAGCAGAG AAACTGAGTA TCAAACCGGG ACAAGATGTT TTATTTCTTA AACGCCTTCG TTGTATTGGC GATGAAAAAG TCATGTTGAT TGAAAATCGT ATCAACATTG ATCTCTGCCC CGGTATTATT GATGTAGATT TTACCAGGGA AAATTTATTT TCAGCAATAG AAAGATTATC TGATAAGAAA ATAAGTTTTT CTGAAAGCCG TTACGCAGCT AAATTAATTG GTAATGAGCG AGGCCATTAT CTTGATATTG GTGAAGACGC ACCTGTTTTG CATTTGGAAC AGTTGGTATT TTTCTCTAGA GGATTGGCCA TTGATTTTGG TAACGTCTGG TTAAAAGGTA ATAAATATTA TCTTGGCACT ATTTTACAGC GCCTGGATGC CTGA
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Protein sequence | MKTLSKSSHI PLYQQVVEWI RESIYSGELV EDDRIPSEFQ IMDMLEVSRG TVKKAVDQLV REGVLVQVQG KGTFVKKENV AYPLGEGLLS FAEALASQKI NFTTSVITSR LEPANRFVAE KLSIKPGQDV LFLKRLRCIG DEKVMLIENR INIDLCPGII DVDFTRENLF SAIERLSDKK ISFSESRYAA KLIGNERGHY LDIGEDAPVL HLEQLVFFSR GLAIDFGNVW LKGNKYYLGT ILQRLDA
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