Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4065 |
Symbol | |
ID | 6484007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3954532 |
End bp | 3955005 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642739322 |
Product | putative PTS system mannitol/fructose-specific transporter subunit IIA |
Protein accession | YP_002043031 |
Protein GI | 194444952 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.405107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.80579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATA TTCATTTTCG CCGTCATTAT GTTCGCCACC TCCCTAAAGA GGTGAGTCAG AATGACATAA TCAAGGCTCT TGCCAGTCCG TTAATTAACG ATGGTATGGT TGTATCTGAT TTTGCCGATC ACGTCATTAC GCGAGAACAG AATTTTCCAA CGGGCCTACC GGTTGAGCCT GTAGGTGTCG CTATTCCACA TACTGATCAC AGGTATGTTC GCCAAAACGC CATTAGCGTT GGAATACTGG CAGAACCCGT CAATTTCGAA GATATGGGCG GGGAACCAGA TCCCGTACCT GTCAGGGTGG TGTTTATGCT TGCTTTAGGT GAAAGCAATA AGCAGCTCAA CGTACTGGGT TGGATTATGG ATGTGATCCA GGATGAGGAT TTTATGCAGC AGTTACTGGT CATGAATGAT GATGAAATTT ATCAGTCAAT TTACACACGC ATATCTGAAA GAGGTGAAGT ATGA
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Protein sequence | MQDIHFRRHY VRHLPKEVSQ NDIIKALASP LINDGMVVSD FADHVITREQ NFPTGLPVEP VGVAIPHTDH RYVRQNAISV GILAEPVNFE DMGGEPDPVP VRVVFMLALG ESNKQLNVLG WIMDVIQDED FMQQLLVMND DEIYQSIYTR ISERGEV
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