Gene SNSL254_A4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4065 
Symbol 
ID6484007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3954532 
End bp3955005 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content45% 
IMG OID642739322 
Productputative PTS system mannitol/fructose-specific transporter subunit IIA 
Protein accessionYP_002043031 
Protein GI194444952 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.405107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.80579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA TTCATTTTCG CCGTCATTAT GTTCGCCACC TCCCTAAAGA GGTGAGTCAG 
AATGACATAA TCAAGGCTCT TGCCAGTCCG TTAATTAACG ATGGTATGGT TGTATCTGAT
TTTGCCGATC ACGTCATTAC GCGAGAACAG AATTTTCCAA CGGGCCTACC GGTTGAGCCT
GTAGGTGTCG CTATTCCACA TACTGATCAC AGGTATGTTC GCCAAAACGC CATTAGCGTT
GGAATACTGG CAGAACCCGT CAATTTCGAA GATATGGGCG GGGAACCAGA TCCCGTACCT
GTCAGGGTGG TGTTTATGCT TGCTTTAGGT GAAAGCAATA AGCAGCTCAA CGTACTGGGT
TGGATTATGG ATGTGATCCA GGATGAGGAT TTTATGCAGC AGTTACTGGT CATGAATGAT
GATGAAATTT ATCAGTCAAT TTACACACGC ATATCTGAAA GAGGTGAAGT ATGA
 
Protein sequence
MQDIHFRRHY VRHLPKEVSQ NDIIKALASP LINDGMVVSD FADHVITREQ NFPTGLPVEP 
VGVAIPHTDH RYVRQNAISV GILAEPVNFE DMGGEPDPVP VRVVFMLALG ESNKQLNVLG
WIMDVIQDED FMQQLLVMND DEIYQSIYTR ISERGEV