Gene SNSL254_A4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4060 
Symbol 
ID6483829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3950135 
End bp3950404 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content40% 
IMG OID642739317 
ProductPTS system HPr enzyme 
Protein accessionYP_002043026 
Protein GI194444723 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.672483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.754895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAC AAACAGTACG CGTTATGAAC AGTACGGGGC TTCATGCGCG GCCAGCCGCT 
ACACTTGCGA AAATTGTCAA AAAATACCAG TCTTCATTAA CGCTAGTTAA TAATGACAAA
GAAATCCCCA TTAAAGGAAT GATGAGTATT TTGGGGGCTG GCGTAAAGGG AAACACAATG
ATTGATTTAA TTTGTGATGG ACAGGATGAA CTGGCTTTTA TGGATGAATT AAAATCTGCA
TTTGCTGATG GCTTTGGTGA GTCAGTATAG
 
Protein sequence
MIRQTVRVMN STGLHARPAA TLAKIVKKYQ SSLTLVNNDK EIPIKGMMSI LGAGVKGNTM 
IDLICDGQDE LAFMDELKSA FADGFGESV