Gene SNSL254_A4051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4051 
Symbol 
ID6486692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3941265 
End bp3941690 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID642739309 
ProductPTS system fructose-specific transporter subunit IIA 
Protein accessionYP_002043018 
Protein GI194444924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0648289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTACCA CACAACCGTT GCCCCACATC CTGCTGCTGA CGCATGGCGG CTGGGGACAA 
CCGCTTTGCA ACAGCCTGCG TATGGTCACG GGCGAAATTA AAGGCGTGAC GGAAATCGCG
CTAATGCCTG TCGATACGCT GGGCGAGTTT TATCAACGCG TCGAGGCCGT GGTGAAAACG
CTGCCGGAAG GCTCGCTGAT CCTGACGGAT TTTGTCGGCG GCACGACGTC CAACGTCGCG
GCGCGGCTAA GCGCCGATTA TCCGGTGGCG GTGATTGCCG GATTGAATGC GTCGCTACTG
CTGGAGGCGC TGGACAGGCG CGAACAAGGG ATGCTAACCG CCTGCGTGGA TGAGTTAGTT
GAGGCCGGGC GCAGTAGCTG CCTGGATGTG GTCGCCCATG TACGTCAGCT ACAACAATCA
CTCTAA
 
Protein sequence
MTTTQPLPHI LLLTHGGWGQ PLCNSLRMVT GEIKGVTEIA LMPVDTLGEF YQRVEAVVKT 
LPEGSLILTD FVGGTTSNVA ARLSADYPVA VIAGLNASLL LEALDRREQG MLTACVDELV
EAGRSSCLDV VAHVRQLQQS L