Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4048 |
Symbol | |
ID | 6482525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3939017 |
End bp | 3939877 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739306 |
Product | PTS system mannose/fructose/sorbose family transporter subunit IID |
Protein accession | YP_002043015 |
Protein GI | 194444832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0519704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA GTGACGTAAT GCAGCATGAA CTGGTTGAGC GCGCGCGGGA AAGCGGGGCG CTGACCAAAG CAGATATCAC CAAAGCCTGG TTTATCTACT GGCTGGGCGC CGAGGTTTCC AGCTCCTATG AGCGCTTACA AAGCCTGATT TTCTGCGCCT CGATGACGCC GATCATCAAA AAACTCTACC CACAAAAAGA GGAGCAGGTA GAAGCGCTAA AACGCCACCT TAACTTTTTT AACTCCGAGC AGACCTTCGG CGCGGTGATT CAGGGCATCT CTATTGCCAT GGAAGAACAA AAAACGCGCG GCGAGCCGAT TAACGACTCG TCTATCACCG GCATTAAAAC TGGCCTGATG GGGCCGCTTG CCGGGATGGG CGACTCGATT ATCTGGGCGG CGGTGATGCC GCTGTTGATA GCGATCTTTA TTCCGTTCGC GGCAAATGGC AGCGCGATGG GCGGTATTAT CCCGCTGATT CTCTACCCGG CGATCACCCT GGCGATCAGC TACGGTATGG TCCACAAGGG ATATACGCTG GGGCGTGATT CGATTATCGG CCTGCTGCAA GGGGGGCGAA TCAAAGAACT GATCTACGGG GCCAACGTGC TGGGTTTGAT CATGATGGGC GCGCTTTCCG CCAGCTACGT CAAAATCACC ACGCCGTTAA AAATTAGCGC TTTGAAAGGA TCTGAAGTGG TGGTTCAGCA GATCCTCGAC TCTATCGCGC CGGGCTTACT GCCACTGGCG GCGGTATTCG CCATCTACTT CTATCTGGTA AAAAAAGGGC CGCGCTACAC CACCATTTTG CTGTCGATTG TCGCACTGAG CATAATCTGT TCGTTGTTGG GAGTGCTGTA A
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Protein sequence | MMNSDVMQHE LVERARESGA LTKADITKAW FIYWLGAEVS SSYERLQSLI FCASMTPIIK KLYPQKEEQV EALKRHLNFF NSEQTFGAVI QGISIAMEEQ KTRGEPINDS SITGIKTGLM GPLAGMGDSI IWAAVMPLLI AIFIPFAANG SAMGGIIPLI LYPAITLAIS YGMVHKGYTL GRDSIIGLLQ GGRIKELIYG ANVLGLIMMG ALSASYVKIT TPLKISALKG SEVVVQQILD SIAPGLLPLA AVFAIYFYLV KKGPRYTTIL LSIVALSIIC SLLGVL
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