Gene SNSL254_A4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4048 
Symbol 
ID6482525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3939017 
End bp3939877 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content54% 
IMG OID642739306 
ProductPTS system mannose/fructose/sorbose family transporter subunit IID 
Protein accessionYP_002043015 
Protein GI194444832 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0519704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA GTGACGTAAT GCAGCATGAA CTGGTTGAGC GCGCGCGGGA AAGCGGGGCG 
CTGACCAAAG CAGATATCAC CAAAGCCTGG TTTATCTACT GGCTGGGCGC CGAGGTTTCC
AGCTCCTATG AGCGCTTACA AAGCCTGATT TTCTGCGCCT CGATGACGCC GATCATCAAA
AAACTCTACC CACAAAAAGA GGAGCAGGTA GAAGCGCTAA AACGCCACCT TAACTTTTTT
AACTCCGAGC AGACCTTCGG CGCGGTGATT CAGGGCATCT CTATTGCCAT GGAAGAACAA
AAAACGCGCG GCGAGCCGAT TAACGACTCG TCTATCACCG GCATTAAAAC TGGCCTGATG
GGGCCGCTTG CCGGGATGGG CGACTCGATT ATCTGGGCGG CGGTGATGCC GCTGTTGATA
GCGATCTTTA TTCCGTTCGC GGCAAATGGC AGCGCGATGG GCGGTATTAT CCCGCTGATT
CTCTACCCGG CGATCACCCT GGCGATCAGC TACGGTATGG TCCACAAGGG ATATACGCTG
GGGCGTGATT CGATTATCGG CCTGCTGCAA GGGGGGCGAA TCAAAGAACT GATCTACGGG
GCCAACGTGC TGGGTTTGAT CATGATGGGC GCGCTTTCCG CCAGCTACGT CAAAATCACC
ACGCCGTTAA AAATTAGCGC TTTGAAAGGA TCTGAAGTGG TGGTTCAGCA GATCCTCGAC
TCTATCGCGC CGGGCTTACT GCCACTGGCG GCGGTATTCG CCATCTACTT CTATCTGGTA
AAAAAAGGGC CGCGCTACAC CACCATTTTG CTGTCGATTG TCGCACTGAG CATAATCTGT
TCGTTGTTGG GAGTGCTGTA A
 
Protein sequence
MMNSDVMQHE LVERARESGA LTKADITKAW FIYWLGAEVS SSYERLQSLI FCASMTPIIK 
KLYPQKEEQV EALKRHLNFF NSEQTFGAVI QGISIAMEEQ KTRGEPINDS SITGIKTGLM
GPLAGMGDSI IWAAVMPLLI AIFIPFAANG SAMGGIIPLI LYPAITLAIS YGMVHKGYTL
GRDSIIGLLQ GGRIKELIYG ANVLGLIMMG ALSASYVKIT TPLKISALKG SEVVVQQILD
SIAPGLLPLA AVFAIYFYLV KKGPRYTTIL LSIVALSIIC SLLGVL