Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4044 |
Symbol | |
ID | 6483293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3935018 |
End bp | 3935965 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739302 |
Product | carboxylate/amino acid/amine transporter |
Protein accession | YP_002043011 |
Protein GI | 194446093 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0378511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG CACGTAAAAA AATAAAACAA CATAACGAGG AAAAAATGGG TTCCACCAGA AAAGGGATGC TAAACGTCCT GATTGCCGCC GTATTGTGGG GGAGTTCAGG CGTTTGCGCG CAGTACATCA TGGAGCAAAG CCGTATGTCG TCACAGTTCC TGACGATGAT ACGTTTGTTA TTCGCCGGGC TGATACTGGT GACCTTCTCC TTTATGCACG GCGATAAGAT ATTTTCGATT CTTAAAAACC GCAAAGATGC CCTGAGTCTG CTGATTTTCT CCGTGGTGGG CGCGCTCACC GTTCAGCTAA CCTTCCTGCT CACGATTGAA AAATCCAATG CCGCCACCGC GACAGTGCTG CAATTTTTAT CGCCGACCAT TATTGTAGCG TGGTTTGCAT TAGCGCGAAG AACACGACCA GGCATTCTGG TCTTAACCGC CATTCTTACA TCGCTTATCG GCACCTTTTT ACTGGTGACT CACGGCAATC CAACATCGCT GTCGATCTCT TCAGGCGCGC TGTTCTGGGG TATCGCCTCC GCATTTGCCG CCGCCTTTTA TACGACCTGG CCTTCCAGGC TAATCGCCCA ATACGGCACG CTGCCAGTGG TCGGCTGGAG TATGTCCTTT GGCGGCCTTA TTCTGCTGCC CTTCTACGCT AAAGAAGGAA CGCACTTTGC GGTGAGCGGC AGCCTGATTC TGGCCTTTTT CTACCTGGTG GTGATCGGTA CGTCGCTGAC GTTCAGCCTG TATTTGAAAG GCGCGCAACT GATTGGTGGC CCCAAAGCCA GCATTTTAAG CTGCGCGGAA CCGTTAAGCA GCGCCCTGCT GTCGCTGCTG CTGTTGGGGA TTAGTTTTAC CTTGCCGGAC TGGCTGGGCA CGCTGCTCAT TCTCTCGTCA GTGATTCTGA TCTCCCTCGA TTCCCGTCGA CGCGCGCGGG CCGCTTAA
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Protein sequence | MMPARKKIKQ HNEEKMGSTR KGMLNVLIAA VLWGSSGVCA QYIMEQSRMS SQFLTMIRLL FAGLILVTFS FMHGDKIFSI LKNRKDALSL LIFSVVGALT VQLTFLLTIE KSNAATATVL QFLSPTIIVA WFALARRTRP GILVLTAILT SLIGTFLLVT HGNPTSLSIS SGALFWGIAS AFAAAFYTTW PSRLIAQYGT LPVVGWSMSF GGLILLPFYA KEGTHFAVSG SLILAFFYLV VIGTSLTFSL YLKGAQLIGG PKASILSCAE PLSSALLSLL LLGISFTLPD WLGTLLILSS VILISLDSRR RARAA
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