Gene SNSL254_A4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4043 
Symbol 
ID6482657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3933862 
End bp3934539 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID642739301 
ProductMg(2+) transport ATPase protein C 
Protein accessionYP_002043010 
Protein GI194443148 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.085999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCTT ATATTTTAAA TTTACTGGCC GCTATGCTGT TGGGCGCGCT GATTGGCGCG 
GAAAGACAAT GGCGTCAACG TATGGCGGGA TTACGCACTA ATGCGCTGGT GGCGACAGGC
GCCGCCGTTT TTATTCTGAG CTCCATGACG ACATCGCCAG ACAGCCCCGG GCGAATTGCG
GCGCAGATTG TCTCTGGGAT TGGCTTTCTG GGGGCGGGCG TCATCATGCG CGAAGGGATG
AATGTGCGCG GGCTGAACAC TGCGGCAACG CTATGGTGTT CGGCGGGCAT CGGCGTGTTA
TGCGGCTTAG GGCAGTTCAA AAATGCGCTG GCGGCGACGA TCATTATTCT TTGCGCCAAT
ATTTTACTGC GTGAAGCGGC GCAGCGTATA AATCAACTCC CGGTATCCGC CGAGGGAGAA
AAACGTTATA TCCTGAAAGT AACCTGTAAT AAAGAAGATG AGAGCGAGGT TCGTCAGTGG
TTACTGAATA TCGTAAAAGA GGCCGCGATC TGTTTACAAG GGTTAGGTTC GGTCCCCGCT
CAGGAACAGG GCTATAAAGA AATTCGTGCC GAGCTCGTGG GTCATGCTGA TTATCGTAAA
ACGCGAGAAC TGATTATATC CAGAATAGGT GATAACGATA ATATCACTGC AATTCACTGG
AGCATTGATA GTCAATAA
 
Protein sequence
MFPYILNLLA AMLLGALIGA ERQWRQRMAG LRTNALVATG AAVFILSSMT TSPDSPGRIA 
AQIVSGIGFL GAGVIMREGM NVRGLNTAAT LWCSAGIGVL CGLGQFKNAL AATIIILCAN
ILLREAAQRI NQLPVSAEGE KRYILKVTCN KEDESEVRQW LLNIVKEAAI CLQGLGSVPA
QEQGYKEIRA ELVGHADYRK TRELIISRIG DNDNITAIHW SIDSQ