Gene SNSL254_A4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4040 
Symbol 
ID6485368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3930122 
End bp3930649 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content52% 
IMG OID642739298 
Producthypothetical protein 
Protein accessionYP_002043007 
Protein GI194443903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.795578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.404343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGC GCTATTTTCA TGGTATCCCA CATCAGAAGG GCAATATCAT GAACAATCGT 
CGTGGTTTAA CCGCCGTCCT GGCGACGTTG ATTACGTTTT CCCTGAGCGC TACGCCTGTG 
CTGGCGAATC CGGGAAATGG CAATGGCGGC GGACATAGTA ATAACGCGGC TAATCAGGGT 
AATAACGGTA ACGGGCATAA AGGAAATGCC GGGCAAAGAA CGGAGCACCG TAAAAATGGC 
GGTAAACCGG ATCACGTCGA GTCGGACATT AGCTACGCTG TCGCCAGGCA ACTGGCAGTG 
AATTTAGGGT TGACGGGTTA TCAGTCTTTA CCTCCGGGGA TTGCGAAAAA TCTGGCGAGA 
GGAAAACCGC TGCCGCCGGG AATCGCTAAA AAAACGGTGC CGGCGTCTAT GCTGGGACAA 
TTACCTTATT ATCCGGGCTA TGAGTGGAAA ATCGTTGGGG ATAATCTGGT GCTGATCGCG 
CTCAGTACCG CGGTGGTCAC AGCGATTATT AATGGCGTAT TTGATTAA
 
Protein sequence
MAGRYFHGIP HQKGNIMNNR RGLTAVLATL ITFSLSATPV LANPGNGNGG GHSNNAANQG 
NNGNGHKGNA GQRTEHRKNG GKPDHVESDI SYAVARQLAV NLGLTGYQSL PPGIAKNLAR 
GKPLPPGIAK KTVPASMLGQ LPYYPGYEWK IVGDNLVLIA LSTAVVTAII NGVFD